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  5. Solyc09g005100.4.1

Solyc09g005100.4.1 (APTX, Solyc09g005100)


Aliases : APTX, Solyc09g005100

Description : Transcription factor bHLH140 OS=Arabidopsis thaliana (sp|q9m041|bh140_arath : 832.0)


Gene families : OG0003628 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003628_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc09g005100.4.1

Target Alias Description ECC score Gene Family Method Actions
Als_g32664 APTX not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g25020 APTX not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_117044g0010 APTX Transcription factor bHLH140 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ppi_g15228 APTX not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13531 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14874 APTX not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004659 prenyltransferase activity IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
MF GO:0008318 protein prenyltransferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0018342 protein prenylation IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0097354 prenylation IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR032566 Znf-C2HE 652 704
IPR002589 Macro_dom 351 423
No external refs found!