Solyc08g083320.4.1 (Solyc08g083320)


Aliases : Solyc08g083320

Description : granule-bound starch (amylose) synthase


Gene families : OG0004950 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004950_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g083320.4.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g117686 No alias EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07851 No alias EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g17693 No alias EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene18411.t1 Aspi01Gene18411 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18412.t1 Aspi01Gene18412 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g11931 No alias EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.19G049200.1 Ceric.19G049200 EC_2.4 glycosyltransferase & original description:... 0.07 OrthoFinder output from all 47 species
GSVIVT01019680001 No alias Carbohydrate metabolism.starch... 0.07 OrthoFinder output from all 47 species
Gb_12995 No alias granule-bound starch (amylose) synthase 0.03 OrthoFinder output from all 47 species
MA_10429460g0010 No alias granule-bound starch (amylose) synthase 0.05 OrthoFinder output from all 47 species
Mp1g23640.1 No alias granule-bound starch (amylose) synthase 0.06 OrthoFinder output from all 47 species
Ore_g19630 No alias EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Smo149847 No alias Carbohydrate metabolism.starch... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 78 338
IPR001296 Glyco_trans_1 389 519
No external refs found!