1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc08g082950.4.1

Solyc08g082950.4.1 (Solyc08g082950)


Aliases : Solyc08g082950

Description : anion channel (QUAC/ALMT)


Gene families : OG0000412 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000412_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g082950.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00112740 ALMT9, AtALMT9,... Solute transport.channels.QUAC/ALMT anion channel 0.03 OrthoFinder output from all 47 species
AMTR_s00030p00178130 evm_27.TU.AmTr_v1... Solute transport.channels.QUAC/ALMT anion channel 0.03 OrthoFinder output from all 47 species
AT1G68600 No alias Aluminium activated malate transporter family protein 0.04 OrthoFinder output from all 47 species
AT3G11680 No alias Aluminium activated malate transporter family protein 0.07 OrthoFinder output from all 47 species
AT4G00910 No alias Aluminium activated malate transporter family protein 0.05 OrthoFinder output from all 47 species
Ala_g09055 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24216 ATALMT12, ALMT12 anion channel *(QUAC/ALMT) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g39072 No alias anion channel *(QUAC/ALMT) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g50264 ALMT9, AtALMT9 anion channel *(QUAC/ALMT) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g62883 ATALMT12, ALMT12 anion channel *(QUAC/ALMT) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene22611.t1 ALMT9, AtALMT9,... anion channel *(QUAC/ALMT) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G011600.1 ALMT9, AtALMT9,... anion channel *(QUAC/ALMT) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.33G034800.1 Ceric.33G034800 anion channel *(QUAC/ALMT) & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g05983 ALMT9, AtALMT9 anion channel *(QUAC/ALMT) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14568 No alias anion channel *(QUAC/ALMT) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g31608 No alias anion channel *(QUAC/ALMT) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011122001 ATALMT12, ALMT12 Solute transport.channels.QUAC/ALMT anion channel 0.02 OrthoFinder output from all 47 species
GSVIVT01011148001 No alias Solute transport.channels.QUAC/ALMT anion channel 0.03 OrthoFinder output from all 47 species
GSVIVT01019627001 No alias Solute transport.channels.QUAC/ALMT anion channel 0.03 OrthoFinder output from all 47 species
GSVIVT01036162001 No alias Solute transport.channels.QUAC/ALMT anion channel 0.03 OrthoFinder output from all 47 species
GSVIVT01037569001 No alias Solute transport.channels.QUAC/ALMT anion channel 0.04 OrthoFinder output from all 47 species
Gb_00031 ATALMT12, ALMT12 anion channel (QUAC/ALMT) 0.03 OrthoFinder output from all 47 species
Gb_03302 No alias anion channel (QUAC/ALMT) 0.05 OrthoFinder output from all 47 species
Gb_09918 ATALMT12, ALMT12 anion channel (QUAC/ALMT) 0.03 OrthoFinder output from all 47 species
Gb_21420 No alias anion channel (QUAC/ALMT) 0.07 OrthoFinder output from all 47 species
Gb_21421 ATALMT12, ALMT12 anion channel (QUAC/ALMT) 0.04 OrthoFinder output from all 47 species
LOC_Os02g45160.1 LOC_Os02g45160 anion channel (QUAC/ALMT) 0.04 OrthoFinder output from all 47 species
LOC_Os04g47930.1 LOC_Os04g47930 anion channel (QUAC/ALMT) 0.04 OrthoFinder output from all 47 species
LOC_Os06g22600.1 LOC_Os06g22600 anion channel (QUAC/ALMT) 0.02 OrthoFinder output from all 47 species
Lfl_g32205 ATALMT12, ALMT12 anion channel *(QUAC/ALMT) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40523 No alias anion channel *(QUAC/ALMT) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g40524 No alias anion channel *(QUAC/ALMT) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10301966g0020 ALMT9, AtALMT9 anion channel (QUAC/ALMT) 0.02 OrthoFinder output from all 47 species
MA_122710g0010 No alias anion channel (QUAC/ALMT) 0.08 OrthoFinder output from all 47 species
MA_312637g0010 No alias anion channel (QUAC/ALMT) 0.09 OrthoFinder output from all 47 species
MA_90634g0010 No alias anion channel (QUAC/ALMT) 0.02 OrthoFinder output from all 47 species
MA_959589g0010 No alias anion channel (QUAC/ALMT) 0.03 OrthoFinder output from all 47 species
Mp7g05600.1 No alias anion channel (QUAC/ALMT) 0.04 OrthoFinder output from all 47 species
Msp_g01198 ALMT9, AtALMT9 anion channel *(QUAC/ALMT) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g30399 No alias anion channel *(QUAC/ALMT) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g44796 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g20950 ALMT9, AtALMT9 anion channel *(QUAC/ALMT) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g36749 No alias anion channel *(QUAC/ALMT) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03842 ALMT9, AtALMT9 anion channel *(QUAC/ALMT) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10124 ALMT9, AtALMT9 anion channel *(QUAC/ALMT) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30033 No alias anion channel *(QUAC/ALMT) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g096140.3.1 Solyc01g096140 anion channel (QUAC/ALMT) 0.08 OrthoFinder output from all 47 species
Solyc05g009580.3.1 ALMT9, AtALMT9,... anion channel (QUAC/ALMT) 0.03 OrthoFinder output from all 47 species
Zm00001e015407_P002 Zm00001e015407 anion channel (QUAC/ALMT) 0.03 OrthoFinder output from all 47 species
Zm00001e037031_P002 Zm00001e037031 anion channel (QUAC/ALMT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015743 malate transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR020966 ALMT 54 406
No external refs found!