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  5. Solyc08g082890.3.1

Solyc08g082890.3.1 (MYB6, AtMYB6, Solyc08g082890)


Aliases : MYB6, AtMYB6, Solyc08g082890

Description : transcription factor (MYB)


Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g082890.3.1
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00146410 ATMYB5, MYB5,... RNA biosynthesis.transcriptional activation.MYB... 0.07 OrthoFinder output from all 47 species
AT1G66380 MYB114, AtMYB114 myb domain protein 114 0.03 OrthoFinder output from all 47 species
AT1G74430 ATMYBCP66, MYB95, ATMYB95 myb domain protein 95 0.05 OrthoFinder output from all 47 species
AT3G13890 MYB26, ATMYB26, MS35 myb domain protein 26 0.03 OrthoFinder output from all 47 species
Adi_g107873 MYB43, AtMYB43 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08791.t1 MYB114,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28345.t1 AtMYB50, MYB50,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene30507.t1 MYB103,... transcriptional regulator *(MS188) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene33140.t1 ATMYB61, MYB61,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene67210.t1 ATMIXTA, MYB16,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001484 AtMYB85, MYB85 not classified & original description: CDS=1-468 0.03 OrthoFinder output from all 47 species
Dcu_g04758 ATMYB61, MYB61 MYB class-R2R3 subgroup-13 transcription factor &... 0.03 OrthoFinder output from all 47 species
Dcu_g26842 AtMYB50, MYB50 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007740001 MYB66, ATMYB66, WER, WER1 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01012447001 MYB33, ATMYB33 RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
GSVIVT01013735001 MYB66, ATMYB66, WER, WER1 RNA biosynthesis.transcriptional activation.MYB... 0.06 OrthoFinder output from all 47 species
GSVIVT01016768001 ATMYB4, MYB4 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01026868001 AtMYB17, MYB17 RNA biosynthesis.transcriptional activation.MYB... 0.05 OrthoFinder output from all 47 species
GSVIVT01029145001 MYB36, AtMYB36 RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
GSVIVT01035462001 MYB3, ATMYB3 RNA biosynthesis.transcriptional activation.MYB... 0.05 OrthoFinder output from all 47 species
LOC_Os05g49310.1 ATMYB21, MYB21,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
LOC_Os09g24800.1 ATMYB94,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
MA_190973g0010 ATMYB4, MYB4 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_62488g0010 AtMYB107, MYB107 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
MA_80033g0010 MYB84, RAX3, ATMYB84 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Pir_g14795 MYB121, ATMYB121 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003255 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-8 transcription factor &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010734 MYB9, AtMYB9 not classified & original description: CDS=1-1800 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0255.g026820 ATMYB46, MYB46 not classified & original description: CDS=1-1707 0.03 OrthoFinder output from all 47 species
Solyc02g067340.4.1 ATMYB94,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc05g055030.2.1 ATMYB15, ATY19,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc06g065100.3.1 ATMYB4, MYB4,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc09g090130.3.1 ATMYB15, ATY19,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Spa_g04064 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g28198 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39933 ATMYB61, MYB61 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001404_P001 ATMYB12, PFG1,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Zm00001e001409_P001 ATMYB12, PFG1,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Zm00001e020004_P001 ATY53, ATMYB67,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 112
IPR001005 SANT/Myb 14 61
No external refs found!