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  5. Solyc08g082400.1.1

Solyc08g082400.1.1 (Solyc08g082400)


Aliases : Solyc08g082400

Description : component NdhS of NDH electron donor-binding subcomplex E


Gene families : OG0007891 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007891_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g082400.1.1
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
Adi_g020197 No alias component *(NdhS) of NDH electron donor-binding... 0.03 OrthoFinder output from all 47 species
Aop_g02044 No alias component *(NdhS) of NDH electron donor-binding... 0.04 OrthoFinder output from all 47 species
Azfi_s0051.g031476 No alias component *(NdhS) of NDH electron donor-binding... 0.03 OrthoFinder output from all 47 species
Cba_g08881 No alias component *(NdhS) of NDH electron donor-binding... 0.07 OrthoFinder output from all 47 species
Dac_g22468 No alias component *(NdhS) of NDH electron donor-binding... 0.03 OrthoFinder output from all 47 species
Dac_g27702 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g14687 No alias component *(NdhS) of NDH electron donor-binding... 0.04 OrthoFinder output from all 47 species
Ehy_g12308 No alias component *(NdhS) of NDH electron donor-binding... 0.03 OrthoFinder output from all 47 species
LOC_Os07g09800.1 LOC_Os07g09800 component NdhS of NDH electron donor-binding subcomplex E 0.05 OrthoFinder output from all 47 species
Mp7g19350.1 No alias component NdhS of NDH electron donor-binding subcomplex E 0.03 OrthoFinder output from all 47 species
Nbi_g28727 No alias component *(NdhS) of NDH electron donor-binding... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001448 No alias component *(NdhS) of NDH electron donor-binding... 0.03 OrthoFinder output from all 47 species
Smo413659 No alias Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.04 OrthoFinder output from all 47 species
Spa_g18947 No alias component *(NdhS) of NDH electron donor-binding... 0.05 OrthoFinder output from all 47 species
Tin_g15455 No alias component *(NdhS) of NDH electron donor-binding... 0.02 OrthoFinder output from all 47 species
Zm00001e012952_P001 Zm00001e012952 component NdhS of NDH electron donor-binding subcomplex E 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009767 photosynthetic electron transport chain IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
CC GO:0005779 obsolete integral component of peroxisomal membrane IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR021659 NdhS 173 224
No external refs found!