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  5. Solyc08g082080.3.1

Solyc08g082080.3.1 (Solyc08g082080)


Aliases : Solyc08g082080

Description : gamma-aminobutyric acid transporter (GAT)


Gene families : OG0000375 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000375_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g082080.3.1
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
Adi_g117650 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Aev_g19713 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.02 OrthoFinder output from all 47 species
Ala_g07945 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.02 OrthoFinder output from all 47 species
Ala_g22107 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.02 OrthoFinder output from all 47 species
Als_g52032 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Aop_g17664 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene31541.t1 Aspi01Gene31541 gamma-aminobutyric acid transporter *(GAT) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene31543.t1 Aspi01Gene31543 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene71620.t1 Aspi01Gene71620 gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0042.g026938 No alias not classified & original description: CDS=503-2446 0.03 OrthoFinder output from all 47 species
Cba_g31499 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g36639 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.04 OrthoFinder output from all 47 species
Dde_g40138 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01034728001 No alias Solute transport.carrier-mediated transport.APC... 0.05 OrthoFinder output from all 47 species
Gb_39426 No alias gamma-aminobutyric acid transporter (GAT) 0.02 OrthoFinder output from all 47 species
LOC_Os01g63854.1 LOC_Os01g63854 gamma-aminobutyric acid transporter (GAT) 0.03 OrthoFinder output from all 47 species
MA_95623g0010 No alias gamma-aminobutyric acid transporter (GAT) 0.03 OrthoFinder output from all 47 species
Msp_g05142 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Msp_g26375 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g00785 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g23086 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15229 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25018 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Spa_g07567 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Spa_g20862 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e019226_P001 Zm00001e019226 gamma-aminobutyric acid transporter (GAT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 30 438
No external refs found!