Solyc08g081900.4.1 (Solyc08g081900)

Aliases : Solyc08g081900

Description : IF-2 translation initiation factor

Gene families : OG0001742 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001742_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc08g081900.4.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00092p00096920	FUG1,...	Protein biosynthesis.organelle translation...	0.03	OrthoFinder output from all 47 species
AT1G17220	FUG1	Translation initiation factor 2, small GTP-binding protein	0.03	OrthoFinder output from all 47 species
Adi_g014194	FUG1	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g02579	No alias	translation initiation factor *(IF-2) & original...	0.03	OrthoFinder output from all 47 species
Als_g14191	FUG1	translation initiation factor *(IF-2) & original...	0.03	OrthoFinder output from all 47 species
Aob_g16703	FUG1	translation initiation factor *(IF-2) & original...	0.03	OrthoFinder output from all 47 species
Aob_g17529	No alias	translation initiation factor *(IF-2) & original...	0.02	OrthoFinder output from all 47 species
Aop_g43380	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g61405	FUG1	translation initiation factor *(IF-2) & original...	0.02	OrthoFinder output from all 47 species
Cba_g22967	No alias	translation initiation factor *(IF-2) & original...	0.03	OrthoFinder output from all 47 species
Cba_g31672	FUG1	translation initiation factor *(IF-2) & original...	0.02	OrthoFinder output from all 47 species
Dac_g04291	FUG1	translation initiation factor *(IF-2) & original...	0.02	OrthoFinder output from all 47 species
Dcu_g09850	No alias	translation initiation factor *(IF-2) & original...	0.03	OrthoFinder output from all 47 species
Len_g19212	FUG1	translation initiation factor *(IF-2) & original...	0.02	OrthoFinder output from all 47 species
Nbi_g14053	FUG1	translation initiation factor *(IF-2) & original...	0.02	OrthoFinder output from all 47 species
Pir_g03114	FUG1	translation initiation factor *(IF-2) & original...	0.02	OrthoFinder output from all 47 species
Ppi_g09075	FUG1	translation initiation factor *(IF-2) & original...	0.03	OrthoFinder output from all 47 species
Ppi_g29435	No alias	translation initiation factor *(IF-2) & original...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006962	No alias	translation initiation factor *(IF-2) & original...	0.03	OrthoFinder output from all 47 species
Smo98506	No alias	Protein biosynthesis.organelle translation...	0.03	OrthoFinder output from all 47 species
Spa_g57144	FUG1	translation initiation factor *(IF-2) & original...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR023115	TIF_IF2_dom3	504	606
IPR000795	T_Tr_GTP-bd_dom	209	365

External Links

No external refs found!

Solyc08g081900.4.1 (Solyc08g081900)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation