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  5. Solyc08g081140.4.1

Solyc08g081140.4.1 (MYC6.2, GL3, Solyc08g081140)


Aliases : MYC6.2, GL3, Solyc08g081140

Description : transcription factor (bHLH)


Gene families : OG0000245 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000245_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g081140.4.1

Target Alias Description ECC score Gene Family Method Actions
AT4G00480 myc1, ATMYC1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 OrthoFinder output from all 47 species
Aev_g20262 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g19244 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g01751 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19341 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07236 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007871 ATMYC2, MYC2,... bHLH-type transcription factor & original description: CDS=1-2427 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013150 ATMYC2, MYC2,... bHLH-type transcription factor & original description: CDS=1-2487 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0227.g026359 ATMYC2, MYC2,... bHLH-type transcription factor & original description: CDS=1-2571 0.03 OrthoFinder output from all 47 species
Spa_g44340 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 438 482
IPR025610 MYC/MYB_N 15 202
No external refs found!