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  5. Solyc08g080870.3.1

Solyc08g080870.3.1 (HMA5, Solyc08g080870)


Aliases : HMA5, Solyc08g080870

Description : P1B-type heavy metal cation-transporting ATPase (HMA)


Gene families : OG0000698 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000698_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g080870.3.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g075859 HMA5 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.03 OrthoFinder output from all 47 species
Aev_g17414 HMA5 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.03 OrthoFinder output from all 47 species
Ala_g10562 HMA5 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.02 OrthoFinder output from all 47 species
Als_g02611 RAN1, HMA7 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.05 OrthoFinder output from all 47 species
Als_g48426 HMA5 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene63022.t2 HMA5, Aspi01Gene63022 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene70950.t1 HMA5, Aspi01Gene70950 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.04 OrthoFinder output from all 47 species
Azfi_s0514.g074936 RAN1, HMA7 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.03 OrthoFinder output from all 47 species
Ceric.16G065300.1 HMA5, Ceric.16G065300 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.04 OrthoFinder output from all 47 species
Dcu_g01902 HMA5 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.02 OrthoFinder output from all 47 species
Dde_g25328 RAN1, HMA7 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.05 OrthoFinder output from all 47 species
Dde_g48896 HMA5 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.02 OrthoFinder output from all 47 species
Gb_15082 HMA5 P1B-type heavy metal cation-transporting ATPase (HMA) 0.04 OrthoFinder output from all 47 species
Lfl_g10499 HMA5 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.04 OrthoFinder output from all 47 species
Msp_g07743 HMA5 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.03 OrthoFinder output from all 47 species
Msp_g13394 RAN1, HMA7 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.02 OrthoFinder output from all 47 species
Nbi_g04977 HMA5 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.02 OrthoFinder output from all 47 species
Nbi_g06794 HMA5 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.04 OrthoFinder output from all 47 species
Ore_g28432 HMA5 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.02 OrthoFinder output from all 47 species
Pir_g12611 HMA5 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.03 OrthoFinder output from all 47 species
Ppi_g09337 RAN1, HMA7 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0060.g015258 RAN1, HMA7 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0123.g021507 RAN1, HMA7 not classified & original description: CDS=1-858 0.03 OrthoFinder output from all 47 species
Zm00001e007286_P002 HMA5, Zm00001e007286 P1B-type heavy metal cation-transporting ATPase (HMA) 0.05 OrthoFinder output from all 47 species
Zm00001e025137_P001 RAN1, HMA7,... P1B-type heavy metal cation-transporting ATPase (HMA) 0.05 OrthoFinder output from all 47 species
Zm00001e037740_P001 RAN1, HMA7,... P1B-type heavy metal cation-transporting ATPase (HMA) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!