Solyc08g080070.1.1 (Solyc08g080070)


Aliases : Solyc08g080070

Description : no hits & (original description: none)


Gene families : OG0000962 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000962_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g080070.1.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00266140 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00061p00162330 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G62981 No alias Protein of unknown function (DUF1191) 0.14 OrthoFinder output from all 47 species
AT3G08600 No alias Protein of unknown function (DUF1191) 0.03 OrthoFinder output from all 47 species
Adi_g016445 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g14748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g38865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12820 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04296 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g06266 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g08505 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05144 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01169 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g69254 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene03047.t1 Aspi01Gene03047 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene32721.t2 Aspi01Gene32721 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0349.g066503 No alias not classified & original description: CDS=1-1581 0.04 OrthoFinder output from all 47 species
Ceric.04G055600.1 Ceric.04G055600 not classified & original description: pacid=50631581... 0.04 OrthoFinder output from all 47 species
Ceric.23G030900.1 Ceric.23G030900 not classified & original description: pacid=50610647... 0.03 OrthoFinder output from all 47 species
Ceric.37G005500.1 Ceric.37G005500 not classified & original description: pacid=50616882... 0.04 OrthoFinder output from all 47 species
Dac_g12795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19939 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07456 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019888001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_05420 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g36127 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g18455 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_8243926g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g09204 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g13751 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g16028 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04333 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g41610 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15492 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05805 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006502 No alias not classified & original description: CDS=1-1200 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008868 No alias not classified & original description: CDS=1-990 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020526 No alias not classified & original description: CDS=1-1455 0.04 OrthoFinder output from all 47 species
Solyc04g055100.1.1 Solyc04g055100 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc08g081850.1.1 Solyc08g081850 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g25531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g37216 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g38505 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51652 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e039266_P001 Zm00001e039266 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
InterPro domains Description Start Stop
IPR010605 DUF1191 28 218
No external refs found!