Solyc08g079800.4.1 (GRF2, AtGRF2, Solyc08g079800)

Aliases : GRF2, AtGRF2, Solyc08g079800

Description : component GRF of GRF-GIF transcriptional complex

Gene families : OG0000528 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000528_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc08g079800.4.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00257830	GRF2, AtGRF2,...	RNA biosynthesis.transcriptional activation.GRF-GIF...	0.05	OrthoFinder output from all 47 species
AT2G22840	GRF1, AtGRF1	growth-regulating factor 1	0.04	OrthoFinder output from all 47 species
AT2G36400	GRF3, AtGRF3	growth-regulating factor 3	0.04	OrthoFinder output from all 47 species
AT4G24150	AtGRF8, GRF8	growth-regulating factor 8	0.04	OrthoFinder output from all 47 species
AT4G37740	GRF2, AtGRF2	growth-regulating factor 2	0.05	OrthoFinder output from all 47 species
AT5G53660	AtGRF7, GRF7	growth-regulating factor 7	0.02	OrthoFinder output from all 47 species
Aev_g38831	GRF2, AtGRF2	component *(GRF) of GRF-GIF transcriptional complex &...	0.02	OrthoFinder output from all 47 species
Ala_g07155	AtGRF8, GRF8	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g51481	GRF2, AtGRF2	component *(GRF) of GRF-GIF transcriptional complex &...	0.02	OrthoFinder output from all 47 species
Aob_g26666	GRF2, AtGRF2	component *(GRF) of GRF-GIF transcriptional complex &...	0.03	OrthoFinder output from all 47 species
Aob_g27286	GRF2, AtGRF2	component *(GRF) of GRF-GIF transcriptional complex &...	0.03	OrthoFinder output from all 47 species
Aop_g07031	GRF2, AtGRF2	component *(GRF) of GRF-GIF transcriptional complex &...	0.02	OrthoFinder output from all 47 species
Aspi01Gene22371.t1	GRF5, AtGRF5,...	component *(GRF) of GRF-GIF transcriptional complex &...	0.04	OrthoFinder output from all 47 species
Aspi01Gene72796.t2	GRF2, AtGRF2,...	component *(GRF) of GRF-GIF transcriptional complex &...	0.02	OrthoFinder output from all 47 species
Azfi_s0197.g057383	GRF2, AtGRF2	component *(GRF) of GRF-GIF transcriptional complex &...	0.05	OrthoFinder output from all 47 species
Ceric.19G047800.1	GRF2, AtGRF2,...	component *(GRF) of GRF-GIF transcriptional complex &...	0.04	OrthoFinder output from all 47 species
Ehy_g11812	GRF5, AtGRF5	component *(GRF) of GRF-GIF transcriptional complex &...	0.06	OrthoFinder output from all 47 species
Ehy_g12992	GRF2, AtGRF2	component *(GRF) of GRF-GIF transcriptional complex &...	0.02	OrthoFinder output from all 47 species
Ehy_g26378	GRF1, AtGRF1	component *(GRF) of GRF-GIF transcriptional complex &...	0.02	OrthoFinder output from all 47 species
Gb_05477	GRF1, AtGRF1	component GRF of GRF-GIF transcriptional complex	0.03	OrthoFinder output from all 47 species
Gb_20400	GRF1, AtGRF1	component GRF of GRF-GIF transcriptional complex	0.03	OrthoFinder output from all 47 species
Len_g15450	GRF2, AtGRF2	component *(GRF) of GRF-GIF transcriptional complex &...	0.03	OrthoFinder output from all 47 species
Lfl_g23207	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g24257	GRF1, AtGRF1	component *(GRF) of GRF-GIF transcriptional complex &...	0.03	OrthoFinder output from all 47 species
Mp8g16900.1	GRF2, AtGRF2	component GRF of GRF-GIF transcriptional complex	0.03	OrthoFinder output from all 47 species
Nbi_g38721	GRF2, AtGRF2	component *(GRF) of GRF-GIF transcriptional complex &...	0.02	OrthoFinder output from all 47 species
Ore_g11185	No alias	auxiliary component *(JMJ24) of COMPASS histone...	0.02	OrthoFinder output from all 47 species
Ore_g33197	GRF2, AtGRF2	component *(GRF) of GRF-GIF transcriptional complex &...	0.02	OrthoFinder output from all 47 species
Pir_g21557	GRF1, AtGRF1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g06953	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g32639	GRF2, AtGRF2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g54451	GRF9, AtGRF9	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0120.g021398	GRF4, AtGRF4	component *(GRF) of GRF-GIF transcriptional complex &...	0.02	OrthoFinder output from all 47 species
Smo420739	GRF2, AtGRF2	RNA biosynthesis.transcriptional activation.GRF-GIF...	0.05	OrthoFinder output from all 47 species
Smo442384	GRF5, AtGRF5	RNA biosynthesis.transcriptional activation.GRF-GIF...	0.04	OrthoFinder output from all 47 species
Zm00001e004684_P002	Zm00001e004684	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Zm00001e007049_P001	GRF5, AtGRF5,...	component GRF of GRF-GIF transcriptional complex	0.07	OrthoFinder output from all 47 species
Zm00001e015561_P002	GRF5, AtGRF5,...	component GRF of GRF-GIF transcriptional complex	0.02	OrthoFinder output from all 47 species
Zm00001e029851_P005	GRF3, AtGRF3,...	component GRF of GRF-GIF transcriptional complex	0.05	OrthoFinder output from all 47 species
Zm00001e036657_P001	GRF6, AtGRF6,...	component GRF of GRF-GIF transcriptional complex	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004497	monooxygenase activity	IEP	HCCA
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	HCCA
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	HCCA
MF	GO:0050661	NADP binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR014978	Gln-Leu-Gln_QLQ	50	82
IPR014977	WRC_dom	112	151

External Links

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Solyc08g079800.4.1 (GRF2, AtGRF2, Solyc08g079800)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation