1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc08g079770.3.1

Solyc08g079770.3.1 (RCD3, CDI3, SLAC1,...)


Aliases : RCD3, CDI3, SLAC1, OZS1, Solyc08g079770

Description : anion channel (SLAC)


Gene families : OG0000650 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000650_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g079770.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00198820 RCD3, CDI3,... Solute transport.channels.SLAC anion channel 0.02 OrthoFinder output from all 47 species
AT1G12480 RCD3, CDI3, SLAC1, OZS1 C4-dicarboxylate transporter/malic acid transport protein 0.04 OrthoFinder output from all 47 species
AT1G62262 SLAH4 SLAC1 homologue 4 0.03 OrthoFinder output from all 47 species
AT1G62280 SLAH1 SLAC1 homologue 1 0.04 OrthoFinder output from all 47 species
AT5G24030 SLAH3 SLAC1 homologue 3 0.03 OrthoFinder output from all 47 species
Adi_g122970 RCD3, CDI3, SLAC1, OZS1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s1105.g097655 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: CDS=80-1609 0.02 OrthoFinder output from all 47 species
Cba_g71393 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G050700.1 RCD3, CDI3,... anion channel *(SLAC) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.12G031400.1 RCD3, CDI3,... anion channel *(SLAC) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.14G072600.1 RCD3, CDI3,... anion channel *(SLAC) & original description:... 0.02 OrthoFinder output from all 47 species
Ehy_g18126 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18127 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g30473 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01019915001 RCD3, CDI3, SLAC1, OZS1 Solute transport.channels.SLAC anion channel 0.04 OrthoFinder output from all 47 species
Gb_39869 RCD3, CDI3, SLAC1, OZS1 anion channel (SLAC) 0.04 OrthoFinder output from all 47 species
LOC_Os01g14520.1 SLAH1, LOC_Os01g14520 anion channel (SLAC) 0.03 OrthoFinder output from all 47 species
LOC_Os04g48530.1 RCD3, CDI3,... anion channel (SLAC) 0.03 OrthoFinder output from all 47 species
LOC_Os05g13320.1 SLAH3, LOC_Os05g13320 anion channel (SLAC) 0.05 OrthoFinder output from all 47 species
MA_175194g0010 RCD3, CDI3, SLAC1, OZS1 anion channel (SLAC) 0.04 OrthoFinder output from all 47 species
Pir_g66064 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g31917 RCD3, CDI3, SLAC1, OZS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo122390 SLAH2 Solute transport.channels.SLAC anion channel 0.07 OrthoFinder output from all 47 species
Solyc03g031590.4.1 SLAH1, Solyc03g031590 anion channel (SLAC) 0.03 OrthoFinder output from all 47 species
Zm00001e007191_P002 RCD3, CDI3,... anion channel (SLAC) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004695 SLAC1/Mae1/Ssu1/TehA 189 493
No external refs found!