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  5. Solyc08g079260.3.1

Solyc08g079260.3.1 (AtHip1, HIP1, TPR11,...)


Aliases : AtHip1, HIP1, TPR11, Solyc08g079260

Description : FAM10 family protein At4g22670 OS=Arabidopsis thaliana (sp|q93yr3|f10al_arath : 252.0)


Gene families : OG0004047 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004047_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Solyc08g079260.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00055560 ATHIP2, TDX,... FAM10 family protein At4g22670 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Adi_g055538 AtHip1, HIP1, TPR11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene54664.t1 AtHip1, HIP1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07396 AtHip1, HIP1, TPR11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001154.6 TPR3 FAM10 family protein At4g22670 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Ehy_g20936 AtHip1, HIP1, TPR11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g01030.1 ATHIP2, TDX,... FAM10 family protein At4g22670 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g08023 AtHip1, HIP1, TPR11 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_101038g0020 ATHIP2, TDX, HIP, ATTDX TPR repeat-containing thioredoxin TDX OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
Ppi_g02021 AtHip1, HIP1, TPR11 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g06799 ATHIP2, TDX, HIP, ATTDX not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR041243 STI1/HOP_DP 366 416
IPR019734 TPR_repeat 161 191
IPR034649 Hip_N 2 43
No external refs found!