1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc08g079230.1.1

Solyc08g079230.1.1 (Solyc08g079230)


Aliases : Solyc08g079230

Description : no hits & (original description: none)


Gene families : OG0000520 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000520_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g079230.1.1
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00138910 evm_27.TU.AmTr_v1... 36.4 kDa proline-rich protein OS=Solanum lycopersicum 0.03 OrthoFinder output from all 47 species
AMTR_s00086p00153720 evm_27.TU.AmTr_v1... 36.4 kDa proline-rich protein OS=Solanum lycopersicum 0.04 OrthoFinder output from all 47 species
AT4G12470 AZI1 azelaic acid induced 1 0.07 OrthoFinder output from all 47 species
AT4G12480 pEARLI 1 Bifunctional inhibitor/lipid-transfer protein/seed... 0.07 OrthoFinder output from all 47 species
AT4G12490 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.11 OrthoFinder output from all 47 species
AT4G12500 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.11 OrthoFinder output from all 47 species
AT4G12510 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 OrthoFinder output from all 47 species
AT4G12520 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 OrthoFinder output from all 47 species
AT4G12545 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.07 OrthoFinder output from all 47 species
AT4G15160 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.06 OrthoFinder output from all 47 species
AT4G22460 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.06 OrthoFinder output from all 47 species
AT5G46890 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.04 OrthoFinder output from all 47 species
AT5G46900 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.05 OrthoFinder output from all 47 species
Aev_g16080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g36746 AIR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g40925 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene09628.t1 Aspi01Gene09628 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene18981.t1 Aspi01Gene18981 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18983.t1 Aspi01Gene18983 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene53691.t1 Aspi01Gene53691 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.27G037800.1 AIR1, Ceric.27G037800 not classified & original description: pacid=50605030... 0.04 OrthoFinder output from all 47 species
Dcu_g08495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36538 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g41635 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001296001 No alias 14 kDa proline-rich protein DC2.15 OS=Daucus carota 0.05 OrthoFinder output from all 47 species
GSVIVT01001298001 No alias 36.4 kDa proline-rich protein OS=Solanum lycopersicum 0.02 OrthoFinder output from all 47 species
GSVIVT01015895001 No alias 36.4 kDa proline-rich protein OS=Solanum lycopersicum 0.05 OrthoFinder output from all 47 species
Gb_33165 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_40202 No alias 14 kDa proline-rich protein DC2.15 OS=Daucus carota... 0.03 OrthoFinder output from all 47 species
LOC_Os02g44310.1 ELP, LOC_Os02g44310 14 kDa proline-rich protein DC2.15 OS=Daucus carota... 0.03 OrthoFinder output from all 47 species
LOC_Os03g01300.1 AZI1, LOC_Os03g01300 Cortical cell-delineating protein OS=Zea mays... 0.03 OrthoFinder output from all 47 species
LOC_Os04g46810.1 ELP, LOC_Os04g46810 14 kDa proline-rich protein DC2.15 OS=Daucus carota... 0.03 OrthoFinder output from all 47 species
LOC_Os10g20860.1 LOC_Os10g20860 Cortical cell-delineating protein OS=Zea mays... 0.03 OrthoFinder output from all 47 species
LOC_Os10g20890.1 ELP, LOC_Os10g20890 pEARLI1-like lipid transfer protein 2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os10g40440.1 ELP, LOC_Os10g40440 Cortical cell-delineating protein OS=Zea mays... 0.06 OrthoFinder output from all 47 species
LOC_Os10g40460.1 LOC_Os10g40460 pEARLI1-like lipid transfer protein 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os10g40470.1 ELP, LOC_Os10g40470 pEARLI1-like lipid transfer protein 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os10g40510.1 LOC_Os10g40510 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os10g40520.1 LOC_Os10g40520 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g40530.1 LOC_Os10g40530 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os10g40614.1 LOC_Os10g40614 14 kDa proline-rich protein DC2.15 OS=Daucus carota... 0.03 OrthoFinder output from all 47 species
Len_g49531 AIR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_214375g0010 No alias 36.4 kDa proline-rich protein OS=Solanum lycopersicum... 0.06 OrthoFinder output from all 47 species
MA_370739g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_591608g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9763758g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g04674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g32331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g49488 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g25284 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63004 AIR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63005 AIR1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007085 No alias not classified & original description: CDS=1-897 0.03 OrthoFinder output from all 47 species
Solyc03g083998.1.1 ELP, Solyc03g083998 14 kDa proline-rich protein DC2.15 OS=Daucus carota... 0.05 OrthoFinder output from all 47 species
Solyc03g090990.1.1 Solyc03g090990 pEARLI1-like lipid transfer protein 2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc03g091000.1.1 Solyc03g091000 pEARLI1-like lipid transfer protein 2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc03g091010.1.1 Solyc03g091010 pEARLI1-like lipid transfer protein 2 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc03g091020.1.1 Solyc03g091020 pEARLI1-like lipid transfer protein 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc03g093050.1.1 Solyc03g093050 pEARLI1-like lipid transfer protein 2 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc03g093060.1.1 Solyc03g093060 pEARLI1-like lipid transfer protein 2 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc08g078910.1.1 ELP, Solyc08g078910 14 kDa proline-rich protein DC2.15 OS=Daucus carota... 0.08 OrthoFinder output from all 47 species
Solyc08g078920.2.1 Solyc08g078920 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc08g078930.1.1 Solyc08g078930 pEARLI1-like lipid transfer protein 2 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Spa_g03442 ELP not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000044_P001 Zm00001e000044 14 kDa proline-rich protein DC2.15 OS=Daucus carota... 0.03 OrthoFinder output from all 47 species
Zm00001e002302_P001 Zm00001e002302 14 kDa proline-rich protein DC2.15 OS=Daucus carota... 0.04 OrthoFinder output from all 47 species
Zm00001e006766_P001 Zm00001e006766 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e006767_P001 Zm00001e006767 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e006965_P001 Zm00001e006965 36.4 kDa proline-rich protein OS=Solanum lycopersicum... 0.04 OrthoFinder output from all 47 species
Zm00001e037901_P001 Zm00001e037901 Cortical cell-delineating protein OS=Zea mays... 0.04 OrthoFinder output from all 47 species
Zm00001e037902_P001 Zm00001e037902 Cortical cell-delineating protein OS=Zea mays... 0.03 OrthoFinder output from all 47 species
Zm00001e041513_P001 Zm00001e041513 14 kDa proline-rich protein DC2.15 OS=Daucus carota... 0.04 OrthoFinder output from all 47 species
Zm00001e041767_P001 Zm00001e041767 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR027923 Hydrophob_seed_dom 53 137
No external refs found!