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  5. Solyc08g078690.3.1

Solyc08g078690.3.1 (PVA12, Solyc08g078690)


Aliases : PVA12, Solyc08g078690

Description : contact site protein (VAP27) of ER-cytoskeleton-plasmamembrane interface


Gene families : OG0000655 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000655_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g078690.3.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g09805 PVA12 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
GSVIVT01027683001 PVA12 Vesicle-associated protein 1-2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
MA_10429123g0020 PVA12 contact site protein (VAP27) of... 0.06 OrthoFinder output from all 47 species
Nbi_g06542 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Zm00001e040240_P001 Zm00001e040240 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0043085 positive regulation of catalytic activity IEP HCCA
BP GO:0044093 positive regulation of molecular function IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
InterPro domains Description Start Stop
IPR000535 MSP_dom 7 111
No external refs found!