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  5. Solyc08g078000.3.1

Solyc08g078000.3.1 (Solyc08g078000)


Aliases : Solyc08g078000

Description : contact site protein (VAP27) of ER-cytoskeleton-plasmamembrane interface


Gene families : OG0000655 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000655_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g078000.3.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g080054 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Cre03.g196900 VAP27, VAP27-1,... Vesicle-associated protein 1-1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dcu_g06823 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Ehy_g28468 PVA12 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Mp3g04340.1 PVA12 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Msp_g03861 PVA12 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Tin_g02524 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Zm00001e040240_P001 Zm00001e040240 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000535 MSP_dom 10 102
No external refs found!