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  5. Solyc08g077820.4.1

Solyc08g077820.4.1 (ATCAT6, CAT6, Solyc08g077820)


Aliases : ATCAT6, CAT6, Solyc08g077820

Description : cationic amino acid transporter (CAT)


Gene families : OG0000575 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000575_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g077820.4.1
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00035p00052900 CAT5,... Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
Aev_g08130 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Ala_g38037 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.02 OrthoFinder output from all 47 species
Ceric.08G046600.1 CAT7, Ceric.08G046600 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g12855 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Gb_27326 AAT1, CAT1 cationic amino acid transporter (CAT) 0.04 OrthoFinder output from all 47 species
Gb_27327 AAT1, CAT1 cationic amino acid transporter (CAT) 0.03 OrthoFinder output from all 47 species
Mp2g18210.1 AAT1, CAT1 cationic amino acid transporter (CAT) 0.02 OrthoFinder output from all 47 species
Mp5g21920.1 AAT1, CAT1 cationic amino acid transporter (CAT) 0.03 OrthoFinder output from all 47 species
Pir_g32596 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e005030_P001 AAT1, CAT1,... cationic amino acid transporter (CAT) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR002293 AA/rel_permease1 46 350
No external refs found!