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  5. Solyc08g077810.2.1

Solyc08g077810.2.1 (ATCAT6, CAT6, Solyc08g077810)


Aliases : ATCAT6, CAT6, Solyc08g077810

Description : Cationic amino acid transporter 6, chloroplastic OS=Arabidopsis thaliana (sp|q9lz20|caat6_arath : 165.0)


Gene families : OG0000575 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000575_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g077810.2.1
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00166780 CAT7,... Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
AMTR_s00035p00052900 CAT5,... Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
AT4G21120 AAT1, CAT1 amino acid transporter 1 0.03 OrthoFinder output from all 47 species
Aop_g12751 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene15711.t1 CAT7, Aspi01Gene15711 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene19677.t1 ATCAT6, CAT6,... cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Ceric.06G060500.1 AAT1, CAT1,... cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Ceric.06G060700.1 AAT1, CAT1,... cationic amino acid transporter *(CAT) & original... 0.04 OrthoFinder output from all 47 species
Dac_g09146 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01012155001 CAT5 Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
GSVIVT01021611001 AAT1, CAT1 Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
LOC_Os01g11160.1 CAT5, LOC_Os01g11160 cationic amino acid transporter (CAT) 0.03 OrthoFinder output from all 47 species
LOC_Os03g43970.1 AAT1, CAT1,... cationic amino acid transporter (CAT) 0.06 OrthoFinder output from all 47 species
LOC_Os06g34830.1 CAT8, LOC_Os06g34830 cationic amino acid transporter (CAT) 0.02 OrthoFinder output from all 47 species
Mp2g18210.1 AAT1, CAT1 cationic amino acid transporter (CAT) 0.02 OrthoFinder output from all 47 species
Mp5g21920.1 AAT1, CAT1 cationic amino acid transporter (CAT) 0.04 OrthoFinder output from all 47 species
Msp_g08387 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Msp_g25519 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.02 OrthoFinder output from all 47 species
Pir_g32596 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.02 OrthoFinder output from all 47 species
Solyc02g070280.3.1 AAT1, CAT1,... cationic amino acid transporter (CAT) 0.03 OrthoFinder output from all 47 species
Spa_g05530 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e005030_P001 AAT1, CAT1,... cationic amino acid transporter (CAT) 0.03 OrthoFinder output from all 47 species
Zm00001e030690_P001 CAT8, Zm00001e030690 cationic amino acid transporter (CAT) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR029485 CAT_C 145 193
No external refs found!