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  5. Solyc08g077700.3.1

Solyc08g077700.3.1 (CUM2, EIF4G, Solyc08g077700)


Aliases : CUM2, EIF4G, Solyc08g077700

Description : component eIF4G of eIF4F mRNA unwinding complex


Gene families : OG0001819 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001819_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Solyc08g077700.3.1
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
Aob_g02409 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.02 OrthoFinder output from all 47 species
Cba_g37073 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.03 OrthoFinder output from all 47 species
MA_10434326g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g08634 CUM2, EIF4G component *(eIF4G) of eIF4F mRNA unwinding complex &... 0.02 OrthoFinder output from all 47 species
Ore_g23190 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
InterPro domains Description Start Stop
IPR003890 MIF4G-like_typ-3 1038 1260
IPR003891 Initiation_fac_eIF4g_MI 1477 1582
No external refs found!