1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc08g077550.3.1

Solyc08g077550.3.1 (NSPN11, ATNPSN11,...)


Aliases : NSPN11, ATNPSN11, NPSN11, Solyc08g077550

Description : Qb-SNARE component NPSN11 of SNARE cell-plate vesicle fusion complex. NPSN group Qb-type SNARE protein


Gene families : OG0002530 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002530_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g077550.3.1

Target Alias Description ECC score Gene Family Method Actions
AT2G35190 NSPN11, ATNPSN11, NPSN11 novel plant snare 11 0.04 OrthoFinder output from all 47 species
Als_g26661 NPSN13, ATNPSN13 Qb-type NPSN-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
LOC_Os07g44350.1 NPSN13,... NPSN group Qb-type SNARE protein 0.03 OrthoFinder output from all 47 species
Msp_g05037 NPSN13, ATNPSN13 Qb-type NPSN-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Ppi_g05019 NPSN13, ATNPSN13 Qb-type NPSN-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005484 SNAP receptor activity IEA Interproscan
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
InterPro domains Description Start Stop
IPR005606 Sec20 150 231
No external refs found!