Solyc08g077500.4.1 (Solyc08g077500)


Aliases : Solyc08g077500

Description : no hits & (original description: none)


Gene families : OG0000978 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000978_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g077500.4.1

Target Alias Description ECC score Gene Family Method Actions
AT1G48090 No alias calcium-dependent lipid-binding family protein 0.04 OrthoFinder output from all 47 species
AT4G17140 No alias pleckstrin homology (PH) domain-containing protein 0.03 OrthoFinder output from all 47 species
Aspi01Gene55590.t1 Aspi01Gene55590 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021428.20 No alias No description available 0.02 OrthoFinder output from all 47 species
Dde_g20978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013270001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01017643001 No alias No description available 0.03 OrthoFinder output from all 47 species
MA_10343795g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10426328g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10428265g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10432463g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_119498g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_295252g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_36612g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_901094g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp7g07580.2 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Nbi_g12905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25798 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR009543 VPS13_VAB 2213 2381
IPR009291 Vps62 1125 1266
IPR009291 Vps62 3072 3191
IPR009291 Vps62 902 1038
No external refs found!