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  5. Solyc08g077240.3.1

Solyc08g077240.3.1 (Solyc08g077240)


Aliases : Solyc08g077240

Description : Probable methyltransferase PMT14 OS=Arabidopsis thaliana (sp|q94ej6|pmte_arath : 949.0)


Gene families : OG0001536 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001536_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g077240.3.1
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AT1G26850 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.04 OrthoFinder output from all 47 species
AT4G18030 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.09 OrthoFinder output from all 47 species
Aev_g17033 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g10032 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g04890 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0003.g007571 No alias not classified & original description: CDS=586-2535 0.07 OrthoFinder output from all 47 species
Dcu_g44128 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g01635 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01010611001 No alias Probable methyltransferase PMT15 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01013233001 No alias Probable methyltransferase PMT14 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
GSVIVT01019997001 No alias Probable methyltransferase PMT2 OS=Arabidopsis thaliana 0.11 OrthoFinder output from all 47 species
GSVIVT01027513001 No alias Probable methyltransferase PMT15 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_30749 No alias Probable methyltransferase PMT17 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os02g45310.1 LOC_Os02g45310 Probable methyltransferase PMT15 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g48230.1 LOC_Os04g48230 Probable methyltransferase PMT15 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os09g24900.1 LOC_Os09g24900 Probable methyltransferase PMT2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os10g36690.4 LOC_Os10g36690 Probable methyltransferase PMT18 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Lfl_g01730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430815g0020 No alias Probable methyltransferase PMT17 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_9992039g0010 No alias Probable methyltransferase PMT17 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Ppi_g28685 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g009600.4.1 Solyc01g009600 Probable methyltransferase PMT15 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc01g010870.3.1 Solyc01g010870 Probable methyltransferase PMT2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc03g116150.4.1 Solyc03g116150 Probable methyltransferase PMT2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc06g069870.3.1 Solyc06g069870 Probable methyltransferase PMT2 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Spa_g12766 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g56746 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g02813 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e004383_P001 Zm00001e004383 Probable methyltransferase PMT18 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Zm00001e023221_P002 Zm00001e023221 Probable methyltransferase PMT15 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e034120_P001 Zm00001e034120 Probable methyltransferase PMT2 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR004159 Put_SAM_MeTrfase 95 600
No external refs found!