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  5. Solyc08g077220.3.1

Solyc08g077220.3.1 (TOM2A, Solyc08g077220)


Aliases : TOM2A, Solyc08g077220

Description : TOM2A tobamovirus multiplication replication host factor


Gene families : OG0001026 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001026_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g077220.3.1
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AT2G20230 No alias Tetraspanin family protein 0.05 OrthoFinder output from all 47 species
AT2G20740 No alias Tetraspanin family protein 0.03 OrthoFinder output from all 47 species
Adi_g023224 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g02011 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g09595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0144.g051608 TOM2A not classified & original description: CDS=40-957 0.02 OrthoFinder output from all 47 species
Dac_g29336 TOM2A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12003 TOM2A not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os08g06250.1 TOM2A, LOC_Os08g06250 Tobamovirus multiplication protein 2A OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g07720 TOM2A not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10430956g0010 TOM2A TOM2A tobamovirus multiplication replication host factor 0.04 OrthoFinder output from all 47 species
Nbi_g04067 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g43392 TOM2A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g23989 TOM2A not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g12602 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012928 No alias not classified & original description: CDS=25-411 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0088.g018542 TOM2A not classified & original description: CDS=285-1187 0.01 OrthoFinder output from all 47 species
Spa_g11018 TOM2A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002408_P001 TOM2A, Zm00001e002408 TOM2A tobamovirus multiplication replication host factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0016020 membrane IEP HCCA
InterPro domains Description Start Stop
IPR018499 Tetraspanin/Peripherin 9 139
No external refs found!