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  5. Solyc08g076530.3.1

Solyc08g076530.3.1 (Solyc08g076530)


Aliases : Solyc08g076530

Description : Binding partner of ACD11 1 OS=Arabidopsis thaliana (sp|q9lfd5|bpa1_arath : 235.0)


Gene families : OG0000642 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000642_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g076530.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00254110 evm_27.TU.AmTr_v1... Binding partner of ACD11 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g022185 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115931 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g22163 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g11474 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g19115 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g43787 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g01201 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37925 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0130.g049026 No alias not classified & original description: CDS=251-1009 0.02 OrthoFinder output from all 47 species
Cba_g05795 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g26076 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g13809 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04385 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g11503 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011624001 No alias Binding partner of ACD11 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01022464001 No alias Binding partner of ACD11 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os04g50790.1 LOC_Os04g50790 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g29520 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04564 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03642 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01572 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g03026 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27405 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c18_3230V3.1 Pp3c18_3230 RNA-binding (RRM/RBD/RNP motifs) family protein 0.01 OrthoFinder output from all 47 species
Pp3c19_9760V3.1 Pp3c19_9760 RNA-binding (RRM/RBD/RNP motifs) family protein 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013208 No alias not classified & original description: CDS=23-751 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0164.g024053 No alias not classified & original description: CDS=195-929 0.03 OrthoFinder output from all 47 species
Sam_g11660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g00916 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e036683_P001 Zm00001e036683 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004017 adenylate kinase activity IEP HCCA
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005740 mitochondrial envelope IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
CC GO:0016469 proton-transporting two-sector ATPase complex IEP HCCA
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP HCCA
MF GO:0019205 nucleobase-containing compound kinase activity IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0031967 organelle envelope IEP HCCA
CC GO:0031975 envelope IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033176 proton-transporting V-type ATPase complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
MF GO:0050145 nucleoside monophosphate kinase activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 7 66
No external refs found!