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  5. Solyc08g076440.4.1

Solyc08g076440.4.1 (Solyc08g076440)


Aliases : Solyc08g076440

Description : no hits & (original description: none)


Gene families : OG0004931 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004931_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g076440.4.1
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
Aop_g20454 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.31G026300.1 Ceric.31G026300 not classified & original description: pacid=50574466... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020961.63 No alias No description available 0.05 OrthoFinder output from all 47 species
Cre03.g149500 No alias No description available 0.08 OrthoFinder output from all 47 species
Dac_g42239 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01028059001 No alias No description available 0.05 OrthoFinder output from all 47 species
MA_19761g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp3g10580.1 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Sam_g11583 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001370_P002 Zm00001e001370 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR007320 PDCD2_C 221 335
IPR002893 Znf_MYND 169 207
No external refs found!