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  5. Solyc08g075940.4.1

Solyc08g075940.4.1 (DRD2, NRPE2, NRPD2A,...)


Aliases : DRD2, NRPE2, NRPD2A, NRPD2, DMS2, Solyc08g075940

Description : subunit 2 of Pol IV RNA polymerase. subunit 2 of Pol V RNA polymerase


Gene families : OG0000511 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000511_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g075940.4.1

Target Alias Description ECC score Gene Family Method Actions
AT3G18090 NRPD2B nuclear RNA polymerase D2B 0.04 OrthoFinder output from all 47 species
MA_10429035g0020 EMB1989, RPB2, NRPB2 subunit 2 of Pol II RNA polymerase 0.02 OrthoFinder output from all 47 species
MA_10429035g0030 EMB1989, RPB2, NRPB2 DNA-directed RNA polymerase II subunit 2 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
MA_10434923g0010 NRPD2B subunit 2 of Pol IV RNA polymerase. subunit 2 of Pol V... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA Interproscan
BP GO:0006351 DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007645 RNA_pol_Rpb2_3 508 567
IPR007647 RNA_pol_Rpb2_5 684 731
IPR007120 DNA-dir_RNAP_su2_dom 741 1111
IPR007641 RNA_pol_Rpb2_7 1113 1210
IPR007646 RNA_pol_Rpb2_4 604 664
IPR007642 RNA_pol_Rpb2_2 300 431
IPR007644 RNA_pol_bsu_protrusion 74 467
No external refs found!