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  5. Solyc08g075060.4.1

Solyc08g075060.4.1 (Solyc08g075060)


Aliases : Solyc08g075060

Description : pectin acetylesterase


Gene families : OG0000637 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000637_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g075060.4.1
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AT3G09405 No alias Pectinacetylesterase family protein 0.05 OrthoFinder output from all 47 species
Aob_g03038 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g66840.1 LOC_Os01g66840 pectin acetylesterase 0.03 OrthoFinder output from all 47 species
LOC_Os10g40290.1 LOC_Os10g40290 Pectin acetylesterase 9 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g39811 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g050750.3.1 Solyc10g050750 pectin acetylesterase 0.08 OrthoFinder output from all 47 species
Tin_g14160 No alias pecTin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e017068_P001 Zm00001e017068 pectin acetylesterase 0.03 OrthoFinder output from all 47 species
Zm00001e017534_P003 Zm00001e017534 Pectin acetylesterase 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e028575_P002 Zm00001e028575 pectin acetylesterase 0.02 OrthoFinder output from all 47 species
Zm00001e035651_P001 Zm00001e035651 pectin acetylesterase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR004963 PAE/NOTUM 5 293
No external refs found!