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  5. Solyc08g074990.3.1

Solyc08g074990.3.1 (Solyc08g074990)


Aliases : Solyc08g074990

Description : pectin acetylesterase


Gene families : OG0000637 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000637_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g074990.3.1

Target Alias Description ECC score Gene Family Method Actions
AT3G05910 No alias Pectinacetylesterase family protein 0.05 OrthoFinder output from all 47 species
AT3G09405 No alias Pectinacetylesterase family protein 0.03 OrthoFinder output from all 47 species
AT4G19420 No alias Pectinacetylesterase family protein 0.03 OrthoFinder output from all 47 species
Aev_g03040 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20025 No alias pectin acetylesterase *(PAE) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g27630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11910 No alias pectin acetylesterase *(PAE) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.35G026400.1 Ceric.35G026400 pectin acetylesterase *(PAE) & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g07334 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07335 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_06563 No alias pectin acetylesterase 0.03 OrthoFinder output from all 47 species
Gb_15309 No alias pectin acetylesterase 0.02 OrthoFinder output from all 47 species
Gb_28228 No alias pectin acetylesterase 0.04 OrthoFinder output from all 47 species
Gb_28230 No alias Pectin acetylesterase 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g66830.1 LOC_Os01g66830 pectin acetylesterase 0.04 OrthoFinder output from all 47 species
LOC_Os02g47400.1 LOC_Os02g47400 pectin acetylesterase 0.01 OrthoFinder output from all 47 species
LOC_Os07g44070.1 LOC_Os07g44070 pectin acetylesterase 0.03 OrthoFinder output from all 47 species
LOC_Os10g40290.1 LOC_Os10g40290 Pectin acetylesterase 9 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_182292g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_52077g0010 No alias pectin acetylesterase 0.04 OrthoFinder output from all 47 species
MA_8032g0010 No alias Pectin acetylesterase 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g43584 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59716 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0171.g024404 No alias not classified & original description: CDS=262-552 0.02 OrthoFinder output from all 47 species
Solyc08g005790.3.1 Solyc08g005790 pectin acetylesterase 0.04 OrthoFinder output from all 47 species
Solyc08g005800.4.1 Solyc08g005800 pectin acetylesterase 0.03 OrthoFinder output from all 47 species
Solyc10g050750.3.1 Solyc10g050750 pectin acetylesterase 0.05 OrthoFinder output from all 47 species
Solyc12g005320.3.1 Solyc12g005320 pectin acetylesterase 0.03 OrthoFinder output from all 47 species
Solyc12g019440.3.1 Solyc12g019440 pectin acetylesterase 0.04 OrthoFinder output from all 47 species
Tin_g14160 No alias pecTin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19814 No alias pecTin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e017068_P001 Zm00001e017068 pectin acetylesterase 0.03 OrthoFinder output from all 47 species
Zm00001e017534_P003 Zm00001e017534 Pectin acetylesterase 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e028575_P002 Zm00001e028575 pectin acetylesterase 0.03 OrthoFinder output from all 47 species
Zm00001e037910_P001 Zm00001e037910 pectin acetylesterase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
InterPro domains Description Start Stop
IPR004963 PAE/NOTUM 23 230
No external refs found!