Aliases : RHM1, ROL1, ATRHM1, Solyc08g069110
Description : UDP-L-rhamnose synthase
Gene families : OG0000903 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000903_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc08g069110.3.1 | |
Cluster | HCCA: Cluster_14 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G53500 | ATRHM2, RHM2,... | NAD-dependent epimerase/dehydratase family protein | 0.06 | OrthoFinder output from all 47 species | |
Aev_g13357 | RHM1, ROL1, ATRHM1 | UDP-L-rhamnose synthase *(RHM) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g06330 | RHM1, ROL1, ATRHM1 | UDP-L-rhamnose synthase *(RHM) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g14366 | RHM1, ROL1, ATRHM1 | UDP-L-rhamnose synthase *(RHM) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0064.g035479 | RHM1, ROL1, ATRHM1 | UDP-L-rhamnose synthase *(RHM) & original description: CDS=1-1959 | 0.03 | OrthoFinder output from all 47 species | |
Cba_g13825 | RHM1, ROL1, ATRHM1 | UDP-L-rhamnose synthase *(RHM) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.15G004900.1 | ATRHM2, RHM2,... | UDP-L-rhamnose synthase *(RHM) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01014091001 | ATRHM3, RHM3 | Carbohydrate metabolism.nucleotide sugar... | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os03g17000.2 | RHM1, ROL1,... | UDP-L-rhamnose synthase | 0.02 | OrthoFinder output from all 47 species | |
MA_10105635g0010 | RHM1, ROL1, ATRHM1 | UDP-L-rhamnose synthase | 0.03 | OrthoFinder output from all 47 species | |
MA_10431083g0010 | RHM1, ROL1, ATRHM1 | UDP-L-rhamnose synthase | 0.03 | OrthoFinder output from all 47 species | |
MA_35415g0010 | ATRHM3, RHM3 | Trifunctional UDP-glucose... | 0.03 | OrthoFinder output from all 47 species | |
Mp1g04880.1 | NRS/ER, UER1 | UDP-L-rhamnose synthase | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g09975 | RHM1, ROL1, ATRHM1 | UDP-L-rhamnose synthase *(RHM) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g31427 | RHM1, ROL1, ATRHM1 | UDP-L-rhamnose synthase *(RHM) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g07572 | RHM1, ROL1, ATRHM1 | UDP-L-rhamnose synthase *(RHM) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ppi_g10663 | NRS/ER, UER1 | dTDP-rhamnose synthase *(NRS-ER) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0011.g005330 | RHM1, ROL1, ATRHM1 | UDP-L-rhamnose synthase *(RHM) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g10633 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g05877 | RHM1, ROL1, ATRHM1 | UDP-L-rhamnose synthase *(RHM) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e001242_P002 | RHM1, ROL1,... | UDP-L-rhamnose synthase | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000145 | exocyst | IEP | HCCA |
BP | GO:0000271 | polysaccharide biosynthetic process | IEP | HCCA |
MF | GO:0003779 | actin binding | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0006813 | potassium ion transport | IEP | HCCA |
BP | GO:0006835 | dicarboxylic acid transport | IEP | HCCA |
BP | GO:0006887 | exocytosis | IEP | HCCA |
MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0009250 | glucan biosynthetic process | IEP | HCCA |
MF | GO:0015079 | potassium ion transmembrane transporter activity | IEP | HCCA |
BP | GO:0015711 | organic anion transport | IEP | HCCA |
BP | GO:0015740 | C4-dicarboxylate transport | IEP | HCCA |
BP | GO:0015743 | malate transport | IEP | HCCA |
BP | GO:0015849 | organic acid transport | IEP | HCCA |
CC | GO:0016020 | membrane | IEP | HCCA |
BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
MF | GO:0016740 | transferase activity | IEP | HCCA |
MF | GO:0016757 | glycosyltransferase activity | IEP | HCCA |
MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
MF | GO:0016759 | cellulose synthase activity | IEP | HCCA |
MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | HCCA |
BP | GO:0030243 | cellulose metabolic process | IEP | HCCA |
BP | GO:0030244 | cellulose biosynthetic process | IEP | HCCA |
BP | GO:0032940 | secretion by cell | IEP | HCCA |
BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | HCCA |
BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | HCCA |
BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
BP | GO:0046903 | secretion | IEP | HCCA |
BP | GO:0046942 | carboxylic acid transport | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
BP | GO:0051273 | beta-glucan metabolic process | IEP | HCCA |
BP | GO:0051274 | beta-glucan biosynthetic process | IEP | HCCA |
BP | GO:0071805 | potassium ion transmembrane transport | IEP | HCCA |
CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
BP | GO:0140352 | export from cell | IEP | HCCA |
No external refs found! |