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  5. LOC_Os03g50310.1

LOC_Os03g50310.1


Description : transcription factor (BBX-CO)


Gene families : OG_01_0000884 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000884_tree ,
OG_02_0000594 (LandPlants) Phylogenetic Tree(s): OG_02_0000594_tree ,
OG_03_0000583 (SeedPlants) Phylogenetic Tree(s): OG_03_0000583_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g50310.1
Cluster HCCA: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00156240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
AMTR_s00073p00061640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.1 Archaeplastida
AT1G25440 No alias B-box type zinc finger protein with CCT domain 0.08 Archaeplastida
AT1G68520 No alias B-box type zinc finger protein with CCT domain 0.07 Archaeplastida
AT1G73870 No alias B-box type zinc finger protein with CCT domain 0.06 Archaeplastida
Cre15.g635100 No alias No description available 0.02 Archaeplastida
GSVIVT01024661001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
LOC_Os02g49880.1 No alias transcription factor (BBX-CO) 0.04 Archaeplastida
MA_10192193g0020 No alias transcription factor (BBX-CO) 0.03 Archaeplastida
MA_10428386g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_470965g0010 No alias transcription factor (BBX-CO) 0.02 Archaeplastida
MA_91504g0010 No alias transcription factor (BBX-CO) 0.03 Archaeplastida
Pp3c4_7080V3.1 No alias B-box type zinc finger protein with CCT domain 0.01 Archaeplastida
Smo438000 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
Solyc04g007210.3.1 No alias transcription factor (BBX-CO) 0.02 Archaeplastida
Solyc07g008540.3.1 No alias transcription factor (BBX-CO) 0.02 Archaeplastida
Zm00001e005433_P002 No alias transcription factor (BBX-CO) 0.04 Archaeplastida
Zm00001e012194_P001 No alias transcription factor (BBX-CO) 0.08 Archaeplastida
Zm00001e015732_P002 No alias transcription factor (BBX-CO) 0.05 Archaeplastida
AMTR_s00025p00156240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.05 LandPlants
AMTR_s00073p00061640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.1 LandPlants
AT1G25440 No alias B-box type zinc finger protein with CCT domain 0.06 LandPlants
AT1G68520 No alias B-box type zinc finger protein with CCT domain 0.05 LandPlants
AT1G73870 No alias B-box type zinc finger protein with CCT domain 0.06 LandPlants
MA_10192193g0020 No alias transcription factor (BBX-CO) 0.01 LandPlants
MA_10428386g0020 No alias no hits & (original description: none) 0.03 LandPlants
MA_470965g0010 No alias transcription factor (BBX-CO) 0.01 LandPlants
MA_91504g0010 No alias transcription factor (BBX-CO) 0.02 LandPlants
Pp3c18_13350V3.1 No alias B-box type zinc finger protein with CCT domain 0.01 LandPlants
Smo438000 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 LandPlants
Solyc02g093590.3.1 No alias transcription factor (BBX-CO) 0.01 LandPlants
Solyc04g007210.3.1 No alias transcription factor (BBX-CO) 0.02 LandPlants
Zm00001e005433_P002 No alias transcription factor (BBX-CO) 0.04 LandPlants
Zm00001e012194_P001 No alias transcription factor (BBX-CO) 0.07 LandPlants
Zm00001e015732_P002 No alias transcription factor (BBX-CO) 0.02 LandPlants
AMTR_s00025p00156240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.05 SeedPlants
AMTR_s00073p00061640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.09 SeedPlants
AT1G25440 No alias B-box type zinc finger protein with CCT domain 0.05 SeedPlants
AT1G68520 No alias B-box type zinc finger protein with CCT domain 0.05 SeedPlants
AT1G73870 No alias B-box type zinc finger protein with CCT domain 0.05 SeedPlants
AT4G25990 CIL CCT motif family protein 0.01 SeedPlants
MA_10192193g0020 No alias transcription factor (BBX-CO) 0.01 SeedPlants
MA_10428386g0020 No alias no hits & (original description: none) 0.03 SeedPlants
MA_470965g0010 No alias transcription factor (BBX-CO) 0.01 SeedPlants
Solyc02g093590.3.1 No alias transcription factor (BBX-CO) 0.01 SeedPlants
Solyc04g007210.3.1 No alias transcription factor (BBX-CO) 0.01 SeedPlants
Zm00001e005433_P002 No alias transcription factor (BBX-CO) 0.04 SeedPlants
Zm00001e012194_P001 No alias transcription factor (BBX-CO) 0.08 SeedPlants
Zm00001e015732_P002 No alias transcription factor (BBX-CO) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR010402 CCT_domain 338 380
IPR000315 Znf_B-box 17 59
No external refs found!