LOC_Os03g50300.1


Description : golgin (CASP)


Gene families : OG_01_0003849 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003849_tree ,
OG_02_0004723 (LandPlants) Phylogenetic Tree(s): OG_02_0004723_tree ,
OG_03_0007543 (SeedPlants) Phylogenetic Tree(s): OG_03_0007543_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g50300.1
Cluster HCCA: Cluster_301

Target Alias Description ECC score Gene Family Method Actions
AT3G18480 CASP, AtCASP CCAAT-displacement protein alternatively spliced product 0.03 Archaeplastida
Cre04.g223900 No alias No description available 0.04 Archaeplastida
Cre08.g382650 No alias Vesicle trafficking.target membrane tethering.Golgi... 0.02 Archaeplastida
GSVIVT01008258001 No alias Vesicle trafficking.target membrane tethering.Golgi... 0.04 Archaeplastida
Mp6g21020.1 No alias golgin (CASP) 0.03 Archaeplastida
Solyc06g069210.3.1 No alias golgin (CASP) 0.04 Archaeplastida
AT3G18480 CASP, AtCASP CCAAT-displacement protein alternatively spliced product 0.03 LandPlants
GSVIVT01008258001 No alias Vesicle trafficking.target membrane tethering.Golgi... 0.04 LandPlants
Gb_08469 No alias golgin (CASP) 0.02 LandPlants
Mp6g21020.1 No alias golgin (CASP) 0.03 LandPlants
Solyc06g069210.3.1 No alias golgin (CASP) 0.04 LandPlants
AT3G18480 CASP, AtCASP CCAAT-displacement protein alternatively spliced product 0.03 SeedPlants
GSVIVT01008258001 No alias Vesicle trafficking.target membrane tethering.Golgi... 0.04 SeedPlants
Gb_08470 No alias golgin (CASP) 0.02 SeedPlants
Solyc06g069210.3.1 No alias golgin (CASP) 0.04 SeedPlants

Type GO Term Name Evidence Source
BP GO:0006891 intra-Golgi vesicle-mediated transport IEA Interproscan
CC GO:0030173 integral component of Golgi membrane IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR012955 CASP_C 417 642
No external refs found!