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  5. Solyc08g068290.3.1

Solyc08g068290.3.1 (Solyc08g068290)


Aliases : Solyc08g068290

Description : transport protein (TSUP)


Gene families : OG0000909 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000909_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g068290.3.1

Target Alias Description ECC score Gene Family Method Actions
Dcu_g42387 No alias transport protein *(TSUP) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22845 No alias transport protein *(TSUP) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g04687 No alias transport protein *(TSUP) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14175 No alias transport protein *(TSUP) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19944 No alias transport protein *(TSUP) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01018980001 No alias Solute transport.carrier-mediated transport.TOC... 0.05 OrthoFinder output from all 47 species
LOC_Os08g29760.1 LOC_Os08g29760 transport protein (TSUP) 0.04 OrthoFinder output from all 47 species
MA_1890g0010 No alias transport protein (TSUP) 0.03 OrthoFinder output from all 47 species
Nbi_g01921 No alias transport protein *(TSUP) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09183 No alias transport protein *(TSUP) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g28226 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g11966 No alias transport protein *(TSUP) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48693 No alias transport protein *(TSUP) & original description: none 0.02 OrthoFinder output from all 47 species
Smo170159 No alias Solute transport.carrier-mediated transport.TOC... 0.03 OrthoFinder output from all 47 species
Zm00001e009714_P002 Zm00001e009714 transport protein (TSUP) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004474 malate synthase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006097 glyoxylate cycle IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046487 glyoxylate metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR002781 TM_pro_TauE-like 85 200
IPR002781 TM_pro_TauE-like 316 441
No external refs found!