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  5. Solyc08g068050.3.1

Solyc08g068050.3.1 (Solyc08g068050)


Aliases : Solyc08g068050

Description : DDT domain-containing protein DDR4 OS=Arabidopsis thaliana (sp|f4idy7|ddr4_arath : 210.0)


Gene families : OG0002395 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002395_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g068050.3.1

Target Alias Description ECC score Gene Family Method Actions
AT1G18950 No alias DDT domain superfamily 0.04 OrthoFinder output from all 47 species
GSVIVT01035750001 No alias DDT domain-containing protein DDR4 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
Gb_41657 No alias DDT domain-containing protein DDR4 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
LOC_Os03g58820.1 LOC_Os03g58820 DDT domain-containing protein DDR4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g01784 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.07 OrthoFinder output from all 47 species
Spa_g30460 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e016677_P001 Zm00001e016677 DDT domain-containing protein DDR4 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000796 condensin complex IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007076 mitotic chromosome condensation IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0030261 chromosome condensation IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA

No InterPro domains available for this sequence

No external refs found!