Solyc08g066600.4.1 (Solyc08g066600)


Aliases : Solyc08g066600

Description : Protein unc-13 homolog OS=Arabidopsis thaliana (sp|q8rx56|unc13_arath : 422.0)


Gene families : OG0000883 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000883_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g066600.4.1

Target Alias Description ECC score Gene Family Method Actions
AT2G25800 No alias Protein of unknown function (DUF810) 0.04 OrthoFinder output from all 47 species
AT5G06970 No alias Protein of unknown function (DUF810) 0.04 OrthoFinder output from all 47 species
Aev_g02574 No alias regulatory protein *(PATROL1) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Aev_g02581 No alias regulatory protein *(PATROL1) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Ala_g02603 No alias regulatory protein *(PATROL1) involved in cellulose... 0.04 OrthoFinder output from all 47 species
Als_g05748 No alias regulatory protein *(PATROL1) involved in cellulose... 0.06 OrthoFinder output from all 47 species
Ceric.13G084700.1 Ceric.13G084700 regulatory protein *(PATROL1) involved in cellulose... 0.05 OrthoFinder output from all 47 species
Dac_g03416 No alias regulatory protein *(PATROL1) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Dde_g39400 No alias regulatory protein *(PATROL1) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Ehy_g01671 No alias regulatory protein *(PATROL1) involved in cellulose... 0.06 OrthoFinder output from all 47 species
GSVIVT01035623001 No alias Protein unc-13 homolog OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01036645001 No alias Protein unc-13 homolog OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_20494 No alias Protein unc-13 homolog OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_29552 No alias regulatory protein (PATROL1) of CSC trafficking 0.05 OrthoFinder output from all 47 species
LOC_Os03g04560.1 LOC_Os03g04560 Protein unc-13 homolog OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os03g47930.1 LOC_Os03g47930 regulatory protein (PATROL1) of CSC trafficking 0.06 OrthoFinder output from all 47 species
LOC_Os08g30070.1 LOC_Os08g30070 Protein unc-13 homolog OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os09g17760.1 LOC_Os09g17760 Protein unc-13 homolog OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g01389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g16187 No alias regulatory protein *(PATROL1) involved in cellulose... 0.1 OrthoFinder output from all 47 species
Lfl_g12110 No alias regulatory protein *(PATROL1) involved in cellulose... 0.03 OrthoFinder output from all 47 species
MA_10431429g0010 No alias Protein unc-13 homolog OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10436219g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10436219g0020 No alias Protein unc-13 homolog OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10436391g0010 No alias Protein unc-13 homolog OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_165845g0010 No alias Protein unc-13 homolog OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_68516g0010 No alias Protein unc-13 homolog OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp4g07000.1 No alias regulatory protein (PATROL1) of CSC trafficking 0.08 OrthoFinder output from all 47 species
Nbi_g03194 No alias regulatory protein *(PATROL1) involved in cellulose... 0.04 OrthoFinder output from all 47 species
Nbi_g10306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0076.g017550 No alias not classified & original description: CDS=962-3898 0.03 OrthoFinder output from all 47 species
Spa_g06397 No alias regulatory protein *(PATROL1) involved in cellulose... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!