Solyc08g062680.1.1 (Solyc08g062680)


Aliases : Solyc08g062680

Description : no hits & (original description: none)


Gene families : OG0000284 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000284_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g062680.1.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00146p00085750 evm_27.TU.AmTr_v1... Protein ALP1-like OS=Arabidopsis thaliana 0.09 OrthoFinder output from all 47 species
AT4G29780 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.18 OrthoFinder output from all 47 species
AT5G12010 No alias unknown protein; INVOLVED IN: response to salt stress;... 0.06 OrthoFinder output from all 47 species
Adi_g030966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g00242 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04527 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g08311 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g11900 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g20020 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21380 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g32884 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14039 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g26409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30059 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g07409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26805 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g56919 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g60197 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g60198 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene08000.t1 Aspi01Gene08000 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene14487.t1 Aspi01Gene14487 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene25549.t1 Aspi01Gene25549 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27301.t1 Aspi01Gene27301 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40222.t1 Aspi01Gene40222 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47954.t1 Aspi01Gene47954 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g10827 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g28438 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g02944 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g20948 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g02691 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12572 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01035416001 No alias Protein ALP1-like OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
Gb_33567 No alias Protein ALP1-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g40070.1 LOC_Os01g40070 Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1... 0.12 OrthoFinder output from all 47 species
LOC_Os02g45610.1 LOC_Os02g45610 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g51520.1 LOC_Os05g51520 Protein ALP1-like OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Len_g11152 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Len_g48929 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g24252 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g25028 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_1840174g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g11559 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g26013 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g16873 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g03122 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g43390 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09548 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g13031 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018320 No alias not classified & original description: CDS=1-1524 0.03 OrthoFinder output from all 47 species
Spa_g04326 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g04327 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g07912 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g07473 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR027806 HARBI1_dom 2 102
No external refs found!