1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc08g059800.3.1

Solyc08g059800.3.1 (Solyc08g059800)


Aliases : Solyc08g059800

Description : microtubule-stabilizing factor (WDL)


Gene families : OG0000418 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000418_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g059800.3.1
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00263250 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.microtubule... 0.04 OrthoFinder output from all 47 species
AT3G23090 No alias TPX2 (targeting protein for Xklp2) protein family 0.03 OrthoFinder output from all 47 species
Adi_g059112 No alias microtubule-stabilizing factor *(WDL) & original... 0.06 OrthoFinder output from all 47 species
Adi_g097977 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Aev_g33020 No alias microtubule-stabilizing factor *(WDL) & original... 0.04 OrthoFinder output from all 47 species
Aev_g35230 No alias microtubule-stabilizing factor *(WDL) & original... 0.04 OrthoFinder output from all 47 species
Ala_g28548 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Als_g15327 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Als_g32683 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Aob_g32079 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Aop_g12096 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene70595.t1 Aspi01Gene70595 microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0013.g013383 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0099.g044176 No alias microtubule-stabilizing factor *(WDL) & original... 0.05 OrthoFinder output from all 47 species
Cba_g03999 No alias microtubule-stabilizing factor *(WDL) & original... 0.04 OrthoFinder output from all 47 species
Cba_g22621 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Cba_g27660 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Cba_g57618 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Ceric.17G067200.1 Ceric.17G067200 microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Dac_g06522 No alias microtubule-stabilizing factor *(WDL) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g03076 No alias microtubule-stabilizing factor *(WDL) & original... 0.05 OrthoFinder output from all 47 species
Dcu_g11946 No alias microtubule-stabilizing factor *(WDL) & original... 0.05 OrthoFinder output from all 47 species
Dcu_g20187 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g01370 No alias microtubule-stabilizing factor *(WDL) & original... 0.05 OrthoFinder output from all 47 species
Ehy_g13552 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g16334 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g19384 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g22088 No alias microtubule-stabilizing factor *(WDL) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01015552001 No alias Cytoskeleton.microtubular network.microtubule... 0.08 OrthoFinder output from all 47 species
Gb_10134 No alias microtubule-stabilizing factor (WDL) 0.07 OrthoFinder output from all 47 species
Gb_12105 No alias microtubule-stabilizing factor (WDL) 0.03 OrthoFinder output from all 47 species
Gb_32183 No alias microtubule-stabilizing factor (WDL) 0.02 OrthoFinder output from all 47 species
LOC_Os03g58480.1 LOC_Os03g58480 microtubule-stabilizing factor (WDL) 0.08 OrthoFinder output from all 47 species
Len_g31668 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Len_g48036 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
MA_10430896g0020 No alias microtubule-stabilizing factor (WDL) 0.05 OrthoFinder output from all 47 species
MA_46848g0010 No alias microtubule-stabilizing factor (WDL) 0.03 OrthoFinder output from all 47 species
Msp_g09168 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Msp_g13406 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Pir_g01348 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g63295 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Sam_g10590 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Spa_g15512 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Spa_g21201 No alias microtubule-stabilizing factor *(WDL) & original... 0.06 OrthoFinder output from all 47 species
Spa_g30848 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e006019_P002 Zm00001e006019 microtubule-stabilizing factor (WDL) 0.04 OrthoFinder output from all 47 species
Zm00001e022692_P001 WVD2, Zm00001e022692 microtubule-stabilizing factor (WDL) 0.02 OrthoFinder output from all 47 species
Zm00001e030579_P001 Zm00001e030579 microtubule-stabilizing factor (WDL) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
CC GO:0070652 HAUS complex IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
InterPro domains Description Start Stop
IPR027329 TPX2_C 237 293
No external refs found!