Solyc08g029290.1.1 (Solyc08g029290)


Aliases : Solyc08g029290

Description : Cytochrome c oxidase subunit 1 OS=Sorghum bicolor (sp|p05502|cox1_sorbi : 90.9)


Gene families : OG0003734 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003734_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g029290.1.1

Target Alias Description ECC score Gene Family Method Actions
ATMG01360 COX1 cytochrome oxidase 0.03 OrthoFinder output from all 47 species
Aev_g13913 COX1 EC_1.9 oxidoreductase acting on heme group of donor &... 0.07 OrthoFinder output from all 47 species
Ala_g26228 COX1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g39523 COX1 EC_1.9 oxidoreductase acting on heme group of donor &... 0.03 OrthoFinder output from all 47 species
Als_g03025 COX1 EC_1.9 oxidoreductase acting on heme group of donor &... 0.03 OrthoFinder output from all 47 species
Aob_g06478 COX1 EC_1.9 oxidoreductase acting on heme group of donor &... 0.05 OrthoFinder output from all 47 species
Cba_g25091 COX1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.1Z245600.1 COX1, Ceric.1Z245600 not classified & original description: pacid=50638984... 0.07 OrthoFinder output from all 47 species
Ceric.1Z287000.1 COX1, Ceric.1Z287000 not classified & original description: pacid=50577020... 0.07 OrthoFinder output from all 47 species
Ceric.1Z295800.1 COX1, Ceric.1Z295800 not classified & original description: pacid=50613701... 0.07 OrthoFinder output from all 47 species
Ceric.1Z313900.1 COX1, Ceric.1Z313900 not classified & original description: pacid=50567670... 0.07 OrthoFinder output from all 47 species
GSVIVT01020676001 COX1 Cytochrome c oxidase subunit 1 OS=Glycine max 0.06 OrthoFinder output from all 47 species
Gb_31333 COX1 component COX1 of cytochrome c oxidase complex 0.06 OrthoFinder output from all 47 species
Lfl_g32196 COX1 EC_1.9 oxidoreductase acting on heme group of donor &... 0.03 OrthoFinder output from all 47 species
Msp_g31774 COX1 EC_1.9 oxidoreductase acting on heme group of donor &... 0.02 OrthoFinder output from all 47 species
Nbi_g21852 COX1 EC_1.9 oxidoreductase acting on heme group of donor &... 0.04 OrthoFinder output from all 47 species
Ore_g07659 COX1 EC_1.9 oxidoreductase acting on heme group of donor &... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0264.g026928 COX1 not classified & original description: CDS=1-180 0.05 OrthoFinder output from all 47 species
Sam_g12101 No alias EC_1.9 oxidoreductase acting on heme group of donor &... 0.04 OrthoFinder output from all 47 species
Solyc00g500186.1.1 COX1, Solyc00g500186 component COX1 of cytochrome c oxidase complex 0.05 OrthoFinder output from all 47 species
Solyc00g500250.1.1 COX1, Solyc00g500250 component COX1 of cytochrome c oxidase complex 0.04 OrthoFinder output from all 47 species
Solyc00g500349.1.1 COX1, Solyc00g500349 component COX1 of cytochrome c oxidase complex 0.04 OrthoFinder output from all 47 species
Spa_g22204 COX1 EC_1.9 oxidoreductase acting on heme group of donor &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEA Interproscan
BP GO:0009060 aerobic respiration IEA Interproscan
MF GO:0020037 heme binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
InterPro domains Description Start Stop
IPR000883 Cyt_C_Oxase_1 5 68
No external refs found!