Solyc08g029290.1.1 (Solyc08g029290)

Aliases : Solyc08g029290

Description : Cytochrome c oxidase subunit 1 OS=Sorghum bicolor (sp|p05502|cox1_sorbi : 90.9)

Gene families : OG0003734 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003734_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc08g029290.1.1

Target	Alias	Description	ECC score	Gene Family Method
ATMG01360	COX1	cytochrome oxidase	0.03	OrthoFinder output from all 47 species
Aev_g13913	COX1	EC_1.9 oxidoreductase acting on heme group of donor &...	0.07	OrthoFinder output from all 47 species
Ala_g26228	COX1	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ala_g39523	COX1	EC_1.9 oxidoreductase acting on heme group of donor &...	0.03	OrthoFinder output from all 47 species
Als_g03025	COX1	EC_1.9 oxidoreductase acting on heme group of donor &...	0.03	OrthoFinder output from all 47 species
Aob_g06478	COX1	EC_1.9 oxidoreductase acting on heme group of donor &...	0.05	OrthoFinder output from all 47 species
Cba_g25091	COX1	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.1Z245600.1	COX1, Ceric.1Z245600	not classified & original description: pacid=50638984...	0.07	OrthoFinder output from all 47 species
Ceric.1Z287000.1	COX1, Ceric.1Z287000	not classified & original description: pacid=50577020...	0.07	OrthoFinder output from all 47 species
Ceric.1Z295800.1	COX1, Ceric.1Z295800	not classified & original description: pacid=50613701...	0.07	OrthoFinder output from all 47 species
Ceric.1Z313900.1	COX1, Ceric.1Z313900	not classified & original description: pacid=50567670...	0.07	OrthoFinder output from all 47 species
GSVIVT01020676001	COX1	Cytochrome c oxidase subunit 1 OS=Glycine max	0.06	OrthoFinder output from all 47 species
Gb_31333	COX1	component COX1 of cytochrome c oxidase complex	0.06	OrthoFinder output from all 47 species
Lfl_g32196	COX1	EC_1.9 oxidoreductase acting on heme group of donor &...	0.03	OrthoFinder output from all 47 species
Msp_g31774	COX1	EC_1.9 oxidoreductase acting on heme group of donor &...	0.02	OrthoFinder output from all 47 species
Nbi_g21852	COX1	EC_1.9 oxidoreductase acting on heme group of donor &...	0.04	OrthoFinder output from all 47 species
Ore_g07659	COX1	EC_1.9 oxidoreductase acting on heme group of donor &...	0.06	OrthoFinder output from all 47 species
Sacu_v1.1_s0264.g026928	COX1	not classified & original description: CDS=1-180	0.05	OrthoFinder output from all 47 species
Sam_g12101	No alias	EC_1.9 oxidoreductase acting on heme group of donor &...	0.04	OrthoFinder output from all 47 species
Solyc00g500186.1.1	COX1, Solyc00g500186	component COX1 of cytochrome c oxidase complex	0.05	OrthoFinder output from all 47 species
Solyc00g500250.1.1	COX1, Solyc00g500250	component COX1 of cytochrome c oxidase complex	0.04	OrthoFinder output from all 47 species
Solyc00g500349.1.1	COX1, Solyc00g500349	component COX1 of cytochrome c oxidase complex	0.04	OrthoFinder output from all 47 species
Spa_g22204	COX1	EC_1.9 oxidoreductase acting on heme group of donor &...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004129	cytochrome-c oxidase activity	IEA	Interproscan
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008324	monoatomic cation transmembrane transporter activity	None	Extended
MF	GO:0009055	electron transfer activity	None	Extended
BP	GO:0009060	aerobic respiration	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015078	proton transmembrane transporter activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	None	Extended
BP	GO:0015980	energy derivation by oxidation of organic compounds	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016675	oxidoreductase activity, acting on a heme group of donors	None	Extended
MF	GO:0020037	heme binding	IEA	Interproscan
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022853	active monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0045333	cellular respiration	None	Extended
MF	GO:0046906	tetrapyrrole binding	None	Extended
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006631	fatty acid metabolic process	IEP	HCCA
CC	GO:0009579	thylakoid	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
MF	GO:0045300	acyl-[acyl-carrier-protein] desaturase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000883	Cyt_C_Oxase_1	5	68

External Links

No external refs found!

Solyc08g029290.1.1 (Solyc08g029290)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation