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  5. Solyc08g029230.4.1

Solyc08g029230.4.1 (Solyc08g029230)


Aliases : Solyc08g029230

Description : pepsin-type protease


Gene families : OG0003872 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003872_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g029230.4.1
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00273130 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Ceric.34G014900.1 Ceric.34G014900 A1-class (Pepsin) protease & original description:... 0.02 OrthoFinder output from all 47 species
Ehy_g09131 No alias A1-class (Pepsin) protease & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000170001 No alias Protein degradation.peptidase families.aspartic-type... 0.03 OrthoFinder output from all 47 species
LOC_Os07g40260.1 LOC_Os07g40260 pepsin-type protease 0.03 OrthoFinder output from all 47 species
Pnu_g08722 No alias A1-class (Pepsin) protease & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR032799 TAXi_C 286 439
IPR032861 TAXi_N 102 266
No external refs found!