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  5. Solyc08g029050.4.1

Solyc08g029050.4.1 (TPR1, Solyc08g029050)


Aliases : TPR1, Solyc08g029050

Description : Protein TPR2 OS=Oryza sativa subsp. japonica (sp|q0j7u6|tpr2_orysj : 832.0)


Gene families : OG0000427 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000427_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g029050.4.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g07310 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Aob_g17933 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene35980.t1 TPL, WSIP1,... transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Cba_g61200 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Gb_33025 TPL, WSIP1 Protein TPR3 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Lfl_g18442 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14256 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species
Spa_g26507 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.03 OrthoFinder output from all 47 species
Tin_g21313 TPL, WSIP1 transcriptional co-repressor *(TPL/TPR) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0008716 D-alanine-D-alanine ligase activity IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 1015 1051
IPR001680 WD40_repeat 577 611
No external refs found!