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  5. Solyc08g023590.4.1

Solyc08g023590.4.1 (LRS1, Solyc08g023590)


Aliases : LRS1, Solyc08g023590

Description : Coatomer subunit alpha-2 OS=Arabidopsis thaliana (sp|q9sjt9|copa2_arath : 84.7)


Gene families : OG0002511 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002511_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g023590.4.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00083820 LRS1,... Dynein assembly factor with WDR repeat domains 1... 0.03 OrthoFinder output from all 47 species
Ceric.06G068400.1 LRS1, Ceric.06G068400 substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Cre13.g583250 LRS1 No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01021896001 LRS1 Dynein assembly factor with WDR repeat domains 1... 0.03 OrthoFinder output from all 47 species
Pp3c1_36050V3.1 LRS1, Pp3c1_36050 Transducin/WD40 repeat-like superfamily protein 0.02 OrthoFinder output from all 47 species
Smo139346 LRS1 Dynein assembly factor with WDR repeat domains 1... 0.02 OrthoFinder output from all 47 species
Zm00001e018453_P003 LRS1, Zm00001e018453 Dynein assembly factor with WDR repeat domains 1... 0.03 OrthoFinder output from all 47 species
Zm00001e039445_P001 LRS1, Zm00001e039445 Dynein assembly factor with WDR repeat domains 1... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 195 226
IPR001680 WD40_repeat 232 268
IPR001680 WD40_repeat 57 92
IPR001680 WD40_repeat 97 136
IPR001680 WD40_repeat 15 48
No external refs found!