LOC_Os03g49200.1


Description : no hits & (original description: none)


Gene families : OG_01_0006286 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006286_tree ,
OG_02_0007694 (LandPlants) Phylogenetic Tree(s): OG_02_0007694_tree ,
OG_03_0007497 (SeedPlants) Phylogenetic Tree(s): OG_03_0007497_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g49200.1
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00252440 evm_27.TU.AmTr_v1... COMPASS-like H3K4 histone methylase component WDR5A... 0.2 Archaeplastida
AT3G27640 No alias Transducin/WD40 repeat-like superfamily protein 0.05 Archaeplastida
Cpa|evm.model.tig00001003.15 No alias No description available 0.01 Archaeplastida
Cre01.g036100 No alias No description available 0.01 Archaeplastida
GSVIVT01032413001 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.12 Archaeplastida
Gb_09523 No alias no hits & (original description: none) 0.12 Archaeplastida
MA_10429760g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10429760g0020 No alias no hits & (original description: none) 0.13 Archaeplastida
Mp8g16590.1 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.08 Archaeplastida
Solyc02g086470.3.1 No alias no hits & (original description: none) 0.11 Archaeplastida
Zm00001e012236_P003 No alias no hits & (original description: none) 0.04 Archaeplastida
AMTR_s00014p00252440 evm_27.TU.AmTr_v1... COMPASS-like H3K4 histone methylase component WDR5A... 0.19 LandPlants
AT3G27640 No alias Transducin/WD40 repeat-like superfamily protein 0.04 LandPlants
GSVIVT01032413001 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.11 LandPlants
Gb_09523 No alias no hits & (original description: none) 0.11 LandPlants
MA_10429760g0010 No alias no hits & (original description: none) 0.02 LandPlants
MA_10429760g0020 No alias no hits & (original description: none) 0.12 LandPlants
Mp8g16590.1 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.07 LandPlants
Solyc02g086470.3.1 No alias no hits & (original description: none) 0.11 LandPlants
Zm00001e012236_P003 No alias no hits & (original description: none) 0.04 LandPlants
AMTR_s00014p00252440 evm_27.TU.AmTr_v1... COMPASS-like H3K4 histone methylase component WDR5A... 0.18 SeedPlants
AT3G27640 No alias Transducin/WD40 repeat-like superfamily protein 0.04 SeedPlants
GSVIVT01032413001 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.11 SeedPlants
Gb_09523 No alias no hits & (original description: none) 0.09 SeedPlants
MA_10429760g0010 No alias no hits & (original description: none) 0.01 SeedPlants
MA_10429760g0020 No alias no hits & (original description: none) 0.1 SeedPlants
Solyc02g086470.3.1 No alias no hits & (original description: none) 0.11 SeedPlants
Zm00001e012236_P003 No alias no hits & (original description: none) 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 152 190
IPR001680 WD40_repeat 233 261
IPR001680 WD40_repeat 115 147
IPR001680 WD40_repeat 330 353
IPR001680 WD40_repeat 364 398
No external refs found!