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  5. Solyc08g014380.3.1

Solyc08g014380.3.1 (Solyc08g014380)


Aliases : Solyc08g014380

Description : pectin acetylesterase


Gene families : OG0000637 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000637_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g014380.3.1
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AT2G46930 No alias Pectinacetylesterase family protein 0.01 OrthoFinder output from all 47 species
AT3G09405 No alias Pectinacetylesterase family protein 0.04 OrthoFinder output from all 47 species
Als_g28037 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11910 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene51900.t1 Aspi01Gene51900 pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s3831.g117105 No alias not classified & original description: CDS=91-1134 0.02 OrthoFinder output from all 47 species
Dac_g07335 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08706 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01028231001 No alias Cell wall.pectin.modification and degradation.pectin... 0.03 OrthoFinder output from all 47 species
LOC_Os01g66830.1 LOC_Os01g66830 pectin acetylesterase 0.04 OrthoFinder output from all 47 species
LOC_Os10g40290.1 LOC_Os10g40290 Pectin acetylesterase 9 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g39811 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10306500g0010 No alias Pectin acetylesterase 8 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_8032g0010 No alias Pectin acetylesterase 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp5g22840.1 No alias pectin acetylesterase 0.04 OrthoFinder output from all 47 species
Msp_g15514 No alias pectin acetylesterase *(PAE) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g43584 No alias pectin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0171.g024404 No alias not classified & original description: CDS=262-552 0.02 OrthoFinder output from all 47 species
Smo271371 No alias Cell wall.pectin.modification and degradation.pectin... 0.03 OrthoFinder output from all 47 species
Solyc08g005800.4.1 Solyc08g005800 pectin acetylesterase 0.02 OrthoFinder output from all 47 species
Spa_g06322 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25230 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19814 No alias pecTin acetylesterase *(PAE) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e017068_P001 Zm00001e017068 pectin acetylesterase 0.02 OrthoFinder output from all 47 species
Zm00001e018996_P001 Zm00001e018996 pectin acetylesterase 0.03 OrthoFinder output from all 47 species
Zm00001e035651_P001 Zm00001e035651 pectin acetylesterase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
InterPro domains Description Start Stop
IPR004963 PAE/NOTUM 36 376
No external refs found!