1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc08g014310.3.1

Solyc08g014310.3.1 (SPDS1, Solyc08g014310)


Aliases : SPDS1, Solyc08g014310

Description : Putrescine N-methyltransferase 2 OS=Nicotiana tabacum (sp|q9seh7|pmt2_tobac : 541.0) & Enzyme classification.EC_2 transferases.EC_2.5 transferase transferring alkyl or aryl group, other than methyl group(50.2.5 : 424.3)


Gene families : OG0001566 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001566_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g014310.3.1
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00268590 SPDS1,... Enzyme classification.EC_2 transferases.EC_2.5... 0.05 OrthoFinder output from all 47 species
AMTR_s00159p00023000 SPDS3, ATSPDS3,... Polyamine... 0.04 OrthoFinder output from all 47 species
Ala_g09370 SPDS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Als_g12253 SPDS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.04 OrthoFinder output from all 47 species
Aob_g13550 SPDS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Aop_g11163 SPDS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Aspi01Gene39972.t1 SPDS1, Aspi01Gene39972 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Cba_g05350 SPDS3, ATSPDS3, SPMS not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g06190 SPDS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Len_g17960 SPDS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.04 OrthoFinder output from all 47 species
Tin_g09235 SPDS1 EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Zm00001e024848_P005 SPDS3, ATSPDS3,... spermine synthase 0.03 OrthoFinder output from all 47 species
Zm00001e037080_P001 SPDS3, ATSPDS3,... spermine synthase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
InterPro domains Description Start Stop
IPR035246 Spermidine_synt_N 52 106
No external refs found!