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  5. Solyc08g013920.3.1

Solyc08g013920.3.1 (Solyc08g013920)


Aliases : Solyc08g013920

Description : Cell number regulator 1 OS=Zea mays (sp|b6tz45|cnr1_maize : 115.0)


Gene families : OG0000293 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000293_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g013920.3.1
Cluster HCCA: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00154260 evm_27.TU.AmTr_v1... Cell number regulator 6 OS=Zea mays 0.04 OrthoFinder output from all 47 species
AT1G14870 PCR2 PLANT CADMIUM RESISTANCE 2 0.04 OrthoFinder output from all 47 species
AT1G58320 No alias PLAC8 family protein 0.03 OrthoFinder output from all 47 species
Adi_g054154 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11618 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07666 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene13596.t1 Aspi01Gene13596 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cre02.g097150 No alias No description available 0.02 OrthoFinder output from all 47 species
Ehy_g31096 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011694001 No alias Protein PLANT CADMIUM RESISTANCE 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01011926001 PCR2 Cell number regulator 2 OS=Zea mays 0.07 OrthoFinder output from all 47 species
LOC_Os02g36950.1 LOC_Os02g36950 Protein PLANT CADMIUM RESISTANCE 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Len_g49051 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp5g01110.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g05225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g00226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09202 PCR11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16610 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007631 No alias not classified & original description: CDS=143-850 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012574 No alias not classified & original description: CDS=485-961 0.02 OrthoFinder output from all 47 species
Smo439474 No alias Cell number regulator 4 OS=Zea mays 0.03 OrthoFinder output from all 47 species
Solyc01g005470.3.1 PCR2, Solyc01g005470 Protein PLANT CADMIUM RESISTANCE 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc10g018920.2.1 Solyc10g018920 Cell number regulator 6 OS=Zea mays... 0.03 OrthoFinder output from all 47 species
Solyc12g037950.2.1 Solyc12g037950 Protein PLANT CADMIUM RESISTANCE 12 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Tin_g03784 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e023819_P001 Zm00001e023819 Cell number regulator 1 OS=Zea mays... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR006461 PLAC_motif_containing 82 180
No external refs found!