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  5. Solyc08g013910.4.1

Solyc08g013910.4.1 (PCR2, Solyc08g013910)


Aliases : PCR2, Solyc08g013910

Description : no hits & (original description: none)


Gene families : OG0000293 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000293_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g013910.4.1
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AT2G40935 No alias PLAC8 family protein 0.03 OrthoFinder output from all 47 species
Adi_g025977 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05930 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g63814 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cre02.g097150 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre09.g408800 No alias No description available 0.02 OrthoFinder output from all 47 species
Dde_g06433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011926001 PCR2 Cell number regulator 2 OS=Zea mays 0.07 OrthoFinder output from all 47 species
LOC_Os02g36940.1 LOC_Os02g36940 Cell number regulator 2 OS=Zea mays... 0.03 OrthoFinder output from all 47 species
LOC_Os02g36950.1 LOC_Os02g36950 Protein PLANT CADMIUM RESISTANCE 3 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Len_g49051 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14213 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007631 No alias not classified & original description: CDS=143-850 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0077.g017588 No alias not classified & original description: CDS=1-600 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006461 PLAC_motif_containing 100 171
No external refs found!