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  5. Solyc08g013900.3.1

Solyc08g013900.3.1 (Solyc08g013900)


Aliases : Solyc08g013900

Description : transcription factor (NLP). transcription factor (NIN)


Gene families : OG0000692 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000692_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g013900.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00173720 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.02 OrthoFinder output from all 47 species
AT1G64530 No alias Plant regulator RWP-RK family protein 0.04 OrthoFinder output from all 47 species
Aev_g13389 NLP7 transcription factor *(NIN) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g22686 NLP7 transcription factor *(NIN) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene67689.t1 Aspi01Gene67689 transcription factor *(NIN) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g10540 No alias transcription factor *(NIN) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g22670 NLP7 transcription factor *(NIN) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05115 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g38007 NLP7 transcription factor *(NIN) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g38866 No alias NLP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g39408 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g29425 NLP7 transcription factor *(NIN) & original description: none 0.02 OrthoFinder output from all 47 species
Smo118918 No alias RNA biosynthesis.transcriptional activation.NIN-like... 0.04 OrthoFinder output from all 47 species
Solyc08g008410.3.1 NLP7, Solyc08g008410 transcription factor (NLP). NLP6/7 nitrate response... 0.03 OrthoFinder output from all 47 species
Spa_g53032 No alias transcription factor *(NIN) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007703_P002 Zm00001e007703 transcription factor (NLP). transcription factor (NIN) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR003035 RWP-RK_dom 560 607
IPR000270 PB1_dom 862 942
No external refs found!