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  5. Solyc08g008480.4.1

Solyc08g008480.4.1 (ATMYB5, MYB5, Solyc08g008480)


Aliases : ATMYB5, MYB5, Solyc08g008480

Description : transcription factor (MYB)


Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g008480.4.1
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00271440 ATMYB102, ATM4,... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
AMTR_s00139p00079430 ATMYB4, MYB4,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Adi_g026314 MYB86, ATMYB86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08312 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-8 transcription factor &... 0.02 OrthoFinder output from all 47 species
Als_g39176 ATMYB61, MYB61 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13874 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16340.t1 ATMIXTA, MYB16,... MYB class-R2R3 subgroup-8 transcription factor &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene35523.t1 MYB86, ATMYB86,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g75895 ATMYB120, MYB120 MYB class-R2R3 subgroup-18 transcription factor &... 0.02 OrthoFinder output from all 47 species
GSVIVT01028984001 AtMYB18, MYB18 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01033648001 MYB36, AtMYB36 RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
Gb_09986 AtMYB79, MYB79 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os02g42850.2 MYB19, AtMYB19,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os02g51799.1 AtMYB93, MYB93,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os11g35390.1 MYB60, AtMYB60,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
MA_10434028g0010 ATMYB21, MYB21, ATMYB3 transcription factor (MYB) 0.06 OrthoFinder output from all 47 species
Sam_g18318 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e001492_P001 BOS1, AtMYB108,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e025724_P001 BW62B, BW62C,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 111
IPR001005 SANT/Myb 14 61
No external refs found!