LOC_Os03g48970.1


Description : component NF-YA of NF-Y transcription factor complex


Gene families : OG_01_0000500 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000500_tree ,
OG_02_0000477 (LandPlants) Phylogenetic Tree(s): OG_02_0000477_tree ,
OG_03_0000645 (SeedPlants) Phylogenetic Tree(s): OG_03_0000645_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os03g48970.1
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00174960 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NF-Y... 0.04 Archaeplastida
GSVIVT01021622001 No alias RNA biosynthesis.transcriptional activation.NF-Y... 0.04 Archaeplastida
MA_10435070g0010 No alias component NF-YA of NF-Y transcription factor complex 0.03 Archaeplastida
Solyc01g006930.3.1 No alias component NF-YA of NF-Y transcription factor complex 0.05 Archaeplastida
AMTR_s00004p00174960 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NF-Y... 0.04 LandPlants
AMTR_s00048p00192930 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NF-Y... 0.03 LandPlants
GSVIVT01021622001 No alias RNA biosynthesis.transcriptional activation.NF-Y... 0.04 LandPlants
MA_10435070g0010 No alias component NF-YA of NF-Y transcription factor complex 0.03 LandPlants
Solyc01g006930.3.1 No alias component NF-YA of NF-Y transcription factor complex 0.05 LandPlants
Zm00001e005004_P001 No alias component NF-YA of NF-Y transcription factor complex 0.02 LandPlants
AMTR_s00048p00192930 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.NF-Y... 0.01 SeedPlants
GSVIVT01025252001 No alias RNA biosynthesis.transcriptional activation.NF-Y... 0.02 SeedPlants
MA_10435070g0010 No alias component NF-YA of NF-Y transcription factor complex 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001289 NFYA 163 218
No external refs found!