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  5. Solyc08g008000.2.1

Solyc08g008000.2.1 (ATSR, SR, Solyc08g008000)


Aliases : ATSR, SR, Solyc08g008000

Description : serine racemase


Gene families : OG0004131 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004131_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g008000.2.1
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
Ala_g21705 ATSR, SR EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000698 ATSR, SR not classified & original description: CDS=219-623 0.03 OrthoFinder output from all 47 species
Sam_g10787 No alias EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009611 response to wounding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR001926 TrpB-like_PALP 295 566
IPR001926 TrpB-like_PALP 28 269
No external refs found!