1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc08g006950.4.1

Solyc08g006950.4.1 (Solyc08g006950)


Aliases : Solyc08g006950

Description : AT-hook motif nuclear-localized protein 10 OS=Arabidopsis thaliana (sp|o22812|ahl10_arath : 154.0)


Gene families : OG0000263 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000263_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc08g006950.4.1

Target Alias Description ECC score Gene Family Method Actions
Aop_g31355 ATAHL1, AHL1 AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00212.t1 ATAHL1, AHL1,... AHL clade-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene20283.t1 Aspi01Gene20283 AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene56436.t1 ATAHL1, AHL1,... AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010299 ATAHL1, AHL1 AHL clade-B transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.16G069600.1 Ceric.16G069600 AHL clade-B transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.34G016000.1 Ceric.34G016000 AHL clade-B transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g11337 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25460 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24172 ATAHL1, AHL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os08g40150.1 LOC_Os08g40150 AT-hook motif nuclear-localized protein 10... 0.03 OrthoFinder output from all 47 species
LOC_Os10g42230.2 LOC_Os10g42230 AT-hook motif nuclear-localized protein 10... 0.02 OrthoFinder output from all 47 species
LOC_Os12g05200.1 ATAHL1, AHL1,... AT-hook motif nuclear-localized protein 1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Tin_g05045 ATAHL1, AHL1 AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR005175 PPC_dom 189 303
No external refs found!